XLOC_043434 (gene) - C. hemisphaerica

Overview
NameXLOC_043434
Unique NameXLOC_043434
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_507:84581..91388+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043434 ID=XLOC_043434|Name=XLOC_043434|organism=Clytia hemisphaerica|type=gene|length=6808bp|location=Sequence derived from alignment at scaffold_507:84581..91388+ (Clytia hemisphaerica)
CAAATAACAAGAATGAACAATCTCTGTACTTTGACTTGTatcttttatac ttttttacaGTTGAGATATGAAAATATTACACGATTTATTATGGTGATGT TTGTGACGAATTAAACATTGAATATCTACCCAACAAAGTAAgtatctcat ttaaaaaatacATCAGGTGCTAGGtttctttatttattttcaagctAGAT ATTTTTAATGACCTCCGTGTACCATCCCCCATTTTCCCTACAAATCAGTG ATTTGACTAGAAAATGAAAGTACAGTAGGTAAATTCTAGACGTGAAGTTA ATTTAAATTCCAGTGGTTTAATTAATTTGATCATACTTAATCTTTTTCTa catacttacttacttactacacATCTTTCAAATCTATGTTCATTGCAATG AATTaattacagtatgtggcccccagaACGTCGGtcaaatttctctcaaa tcgagaggaaaaaaagctttacaaaaatttttgctgcatgcgAAACTTTA TTTCcgaaaagttctttttcaaaacttcaacaatatttttcaatcgctag gtagcttttttctgatGGCCCCAAAAATATAGGTTTGCATTATTACCGAt ttcatattttctttaaaatatgaACATATAAACctcattttttgcaaaat ctagtCAAACAAATGTATGGTTCCAAGATTTTTTCCGTTACTCATTTTTA GAGTTTTCAGTTCCATCAATGCTGGTTCTAGgggccccaaaatactggtc cacctttaagatgctataccTTTCACTCATCTTCTAAAGGTATTATTATT AGGTATTGagaaatgttttgatgttgatgttTGTTCAGCGTGATATTGGC TACTAATTTTTATGCGGAGAAATATAAATCTCAAAAGTCCGTTTAAGGCT TaagctttttgataaaatgaatgGTCCTGAAAAGTGGTACGGCGTAATTT GACAAGCTCCTTCTTTTAGCCTTGCTTGAACACGAGCTCATTCTCGAGGA AAACAATAAGAAGACTATGATCAATTgaccattttttcaaatttgggaCG TAGCTTTTATGTTTTTGTCATAATTTCATGAACTtcaatggggttatttg ttccTCAGTTTTTGCACCCGCAGGGCGCCTTCATGAGCAACGCGCTCGCG CGTTTAAAGATACGGTTTGTCGGCTTTTTTGTAGGCCTGGTCGAATCTCG GAAAATCCATGTCCTGATTATTCAGATCAAATTTACTACGCTTCGATAAT CTATTTTGAAATGCGAGAGACAAAATCCAAACGATAACCCAGTTTTTGAC TTGATAACTCAAACCTTGCTTATATTCgtcttttatttcattttccttcG TAGGTTTTAATCTTTTCTACAGAGTTATTTGTTTAATCGTCGAGTGAatc gtttgttttgaaatatgtGCTTTAATCTGTTTAATAAACGTTCTTCTGTT TGCGCTTTTGCTTTAAGCCTTGTGTCCACTCCGGAAAGTTTGCAACGGAT CGGTATGGATTGGAAcgttttctattgttttaaggATTATCTTCGACCCA GTTGCCACATATTTTTTTCACGTAAACGGTTGTTCACGTGTTTGGATCAA AACAGATAAAATAATTCGATTTCTTTTGTATGAAAGTTGTAAACAGAAAG AATCTACTTTTAAAAAGTCCGAAGTGGAATTTGGAAAACGATTCAGATcg cttttcttcttctttccaatccgtactagactagtaaactagtcggttat tacttataataaaatagacgatgttatcgtccgtataatataatattatg atataacatagtttgtatactataaaacgtaatatgtttcgcggcggata gatTCTGTGTTTACGGACGATATCAATTTGGCGCTTTTCTCGATTTTATC TTTGCCCTTACCGACCTTGGAGAAGGGTCGGtgatttttgcggaaaatcc cTGCAGATTTATAGACGAACTTGgtaagaaaaccaaaacaacacGGGAAG TAGGGAGTGAACTTTATCCAAaaaatggttgttttctttGAGCAAGATGG TTCTGGGTCTGGTGAAGAAAAGAAGAATGTTCTTGTATGATAATTTGGAG GCTGAAGACCTTACATAAACGCATTTGCTGTTTCTTAAGCTTTTTTGACA ATATTAGTTAGAAGGGATTGTTATATTTCCTCAAGGCCCACAAACAAATT CTAACttagattttttggaaattttattaatttttataaattttaccaGT CAGACCCGACTGTTTGTTAACATTTGTTCGAACCGGGCCGGCCGGTCACA CCGctaaccaaaatccaaaatttacGCTTTTCTACCAAAttgatatagtc taagacaacagctactcccgtaaaaaattcccgtcttcacgtttgttcct cttactTAGAtaagatgaaactcgtcttagactatagcatagtctaataa taaaactgtcaatcaaataatgtaaaaactaattaaatattcagcgcccg tgagagaaaaggaaaataaccgactagaagctacttccaacgcctttttt tcttcacctaaaatcgtaaggagagacatacagatttctgtatgtctgac ccgtgcgggattgcatttatttttctttctgtttattgcgtttttagaaa tgctcgtttatttatatgttcccatgttcaatgttactatgaaatatcat ttagtcaaaaaagttggatggaatctcaaaaacctaaaaaatgttgtaaa attaaacaacgtTTTTTTGAGGGAAGTAGCTTCTAGTCGTTGAAATtcag aaaagagacgcaacttcaccccttcgattctttttatttggagcttgatt ttttgtatatgggtctgttttcaacgactagtttactagtctaatcCGTA CCGATCTGTTGCAAACTTTCCGGTGGAGTGGACACATGGCTTTACGTATT TAAAAGATTTATTTAGATAAAGAGAATTAAAACTATAAAACTATAAAACT ATAAAAACTAAATAAGAGACTTTTGCAGTAAAGCTTGTTTTGGTCGCTGA GCGCTTTTATACTTCCattgaaaattagataaaaagttGCGAAGTGCACC ACGAGCAttaatgaatgttgaatgttgagcaattttggttttaaaatttc GATTTCTTTCGAACAACTTCAATTGAAGAATAAAGATCATGGAGGATTTT GTTCTCAACTGACATTCATTTCTCTTTTACCTGTTCAGACTATATGTGCA AGAAGtgacatagtgtcctccccccttTGTAAAGTCAGAACCCCGACTTT GCCCCAGTTGTTGCTTGTCTGAGAGGTGAACGTGCGAGTCGCACATTTAC CCCAGACCAAGTAGCACTGAAAGATCAAAAGCTGAACGAAGTCTTGTCGT CTTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatatttt catttttatttatttatttaaagacAATTAACTTTTGTAACACAAAAGAC CCGTGCCGGGACTGGCTCCGGTAATAGTATATACcagtttaagaaaaaaa atttttttaataaaaaagatttctctTTTACTTTACCCTACTTTAGTGTC TTAGTGGTTGACTTTGCCATTTATATTTTTTCAGTATTCGATGATAGACA CTGCTAACGTGTTTATGCTATAGTGTCTGATTAAATGCTCTCTGGCACTC TTTCTGGTTATTCAAGGGCTATGTTCGTGTAACACTTCCTCAAATTCGAT ACTCCCTTATGAGCGCGGGCGTACCATGGCCTCTGCTATTGGCTagtata atttttgaaaacgaaggtGATGTCTGTTTCATGAACTCAGTGCCGTcaaa aatcatcagaaagcaaagttcattCAGAAAGTAGGGTGGGAAAAAGTTCT ATAAATGTTGATTCTAAGACTCGGAATTGAACCAAAAGAAATGTGCATAC GCGCAGCTTCCGATTTATATCAAGAAAAGTTTTGCATTTGAAAAGTATTA TCCTGGCTgtatttcaatctttttccatttttcttacGCATAGGTATTTT ACCTGTAAGTTTTTTTAATCGATGCCTCATTCCTGGATTGCTTGGAACTA AGACTATAAAACAATATAGCATTGCTGTTTGTGGAATTTctatatttgct ttatttctccAGGTTTACCTGCTGTCATCATAGTCTGAAAACATGGCTGG AGAATGGATGAAGCCCACCCTGATCCTTTCATTGTATGGTTTCTTCAAAG AGATGAAGCCATCGGAATCATTCCTCACACCATACCTCAACAGCACATTT AAAAACATCCCCAAGAAAACCATTTCTGATGAAATCTACCCTATATCCAC ATATTCGTATCTCGTCTTCTTATTCTTAGTACTCATGACCACAGACTTCC TACGTTATAAACCGCTAGTCATCATTGAATCCTTAGCTTACCTGGCCACA CGTGTTATCTTAGTTTGGGGTCAAGGTGTTTTGATCATGCAGATTATGCA AATGACTTATGGTCTTGCAAGTGCCACTGAAGTTGCTTATTATTCCTACA TCTATGCACTTGTAGATCGTGAGCATTACCAGAAAGTGTCCAGTTATACT CGACTTGCTGTTTTAGCTGGCAAAGGTGTTGGTGATTTGAGTGGACAACT TCTGTTATCGACAAATACAGTCAATCTATTACAATTGAATTACGTTTCGT TGGCCAGTGTGGCTGTTTCAGTGATCGCTGCCTGTTTCTTACCTAAAGTC ACAGGTTCTGTATTTGGAACCATGAAAGAGGAGAAAGGATTCGAACGGTT TGACAACGAGGAAAGGATAGACGATGAAGATCAAACCGACCAGATAACTT CCAGCAAAAACATTGTCCCACAAACTTGTTCCGTTAGATTGcaacaatat tttaaaaatatttggcacacTTTCAAATCATGTTATTCTGATANAAACTT GTTCCGTTAGATTGcaacaatattttaaaaatatttggcacatTTTCAAA TCATGTTATTctgataaaaaacttttacaaTGGTCATGTTTTTGGGCCAT CGCAATGTGTGGTGGCCTACAAGTagaagattacgtcatgaacctGTGGT CAGCTTTGCAAGGTGATGAGATCAAGAAAGCTTACAATGGAGCTGTTTTT GCTGCAGGCACCATAACAAGTGCCGTTTGTGTGTTTCTCTTTTCTATCGC TAAAGTTGATTGGAACTCAGTATCGGAAGTTGTAATTGGTTGTCTCTCTA TCGTGCAAAGCACCATGGTCTTTAACATGGCGTGGACCAGTGACGTCACG ATCGCTTACGTCATGTATGTGATTTTCAGAGCATCGTATGCTTTCAGTTT GACTGTTGCAAGGTAGGTTGGGTTGTTTTCTTTAGTTGGTATGAATACAG AAGATGAATGCCAAAACTAATTAGTAGCAATAATTTTGTCGATAAGGTAT ATGTTTTCAACTTGTCAGTATATTTTTCATGATTAAAGTTTTCAGATAGC AAATCGTTTGACGATGGATGGTTTTGGTTTAGTATTTGGTTGGAACACTC TGGTCGCTGTTTGTTTGCAAAGTATTTTGACGTTGATCGTTGTTGATAAA AATGGATTAGACCTTCCTGAAAGCAAGCAGGTATAGTTTTGTACATGATG TGTGCATGGATATGATAATTATAGCctaaaccccggggggggggtaacCT TGATGGCCGACGGAGACGTACCACTGGAGTTTTAAAAgcggaccctgtca gatatgaatgttttgtgaattttctaatttctactctgaaaattgtacaa aatcatataaacattttgaaaattcgtaaatttgggaccctctgtcagat atcttcaaaACTTAAGAGAGAGGCCCTGACCAGCAGTACTTctccgtacc caattttgcctaagtgctcCCTGGGGCCTCAACACAAGCACTATACAGAG AGGACACCGAAAAAGTAACGAGCacattaattttcttttgtaaTGTCTGA CATCTCTTTCTCAATATAGATCTTGCACTTGCAATAGCATTTTTTTTATC CACAATAATAGAACGAATTATCATATTCTGATCTCTAgagtgattttgat gaaaacgTTGACTTGCACATTGTCAGTGAAGCCAGTACGTCAATATCCCT AACGCCACTGGTACCGTAAAAACATTCAATGTCCTAAATTACATAGTGGT TACTAATAGTTTCGTTTATTCTAATTCTCTCCAAAACTTTACATGTGACC TTCATTCCTTGTTGGTTTATTGGGAGACAATGCGAGCAAAATNCCTTCAT tccttgttggtttgttttgaagTTAATATGAGCaaagtttatttaaaaaa tgtgtgtatatcatttttaaatattttttttctagttCGTGATTTACGGA TGTTATTTTGTTTTGGTGGCTTTGATCTTCTTTCTGCTTCCATTATGGCA CGTCTTGCAAAAGTCCTTTGCGTGGATGAAAAGTCGATCCGGCCGACAGA AGAACGACACATCTAAGAATTCAACTATTTGAATTTGCAGGTTGACTAGA TGAAGTCTTGTCTTTATATTATATATCTTGTATCATCTTAACCCTCCcat aatacttttttttttttgatacctcGGACGATAGCATCAGgtttgaaacc ttttttttagaattgaaaatttatagaatttaaaaaattattctaatatA AGCGATCt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069754TCONS_00069754Clytia hemisphaericatranscript
TCONS_00069755TCONS_00069755Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069754-proteinTCONS_00069754-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_507supercontigscaffold_507:84581..91388 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.29 1 0.83 0.69 0.24 0 0.17 0.28 0.72 1.66 5.76 1.55 7.1 7.67 7.23 4.39 4.35 6.16 3.4 2.01 2.79 3.01 2.48 3.4 9.57 9.75 2.46 3.41 3.32 2.35