XLOC_043639 (gene) - C. hemisphaerica

Overview
NameXLOC_043639
Unique NameXLOC_043639
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_513:4983..11529-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043639 ID=XLOC_043639|Name=XLOC_043639|organism=Clytia hemisphaerica|type=gene|length=6547bp|location=Sequence derived from alignment at scaffold_513:4983..11529- (Clytia hemisphaerica)
TACAGAATAATATAATAAAAAACAAATAAGAAAAATGTCATCTTCCAAAC GAAAATTGAAAGTGAAGAAGAATTCGTCCAACGAGGAAAACGTCAAAAAA CAGATTATGGATCTCAAAGAAGTTTTATCTCCACTATCCTACCCTGATGA TGTGACAGAAAAGATCACTTCTGCTTTCAGGTGAGAGACTTTTATATTTT TTTACTCGGAAACTTCCGCAAATTTGAGAGACCACCAATTCTTTTTGTCA ATTCTACACTCTATCAGGAGCATAATTTTTAATTTTGCGCTGATCTAAGA GTACGAAAAACCTGTTTAAGGCCTTTTCTGAATTCAGATGCTGATCTAGA AACTGTCTTTAGAACTATTCAAAGTTATAATTACCTTATGTCTATGCGGC TAGGCAAGCCTGCCTTTTTTCGAGCAAATAAGTTTGAATAAATGTTTCAT TCAAACCTTTAAGGTGTATGTACATTAATTTGGCTTAGGGCGTGGCGCTG ATATTGTTTGATACATATTTCTTTATAAGAACAAATTATATAGGAACATA AGGCTTTGATGACCAAAGTATTAAGATCATTTTAAGGCTTTGCGGACCCT AAACAGCCGATTTCATTGCAAAATTAGAATAGGTTTAAATTTTAAATAGT TCAGAACATCCTGAGGCTGCAAATAGTTAGGGTGTTCTTATATTAAAAAA CGTTTAATGACTGCCTGCAATTTTTTCTTCTTAGGGACAAAACAGACTAC GAAAATGGTAGGATTTAAATCTTTGCAACAATGAATAATAAGTGGACGTT AATGTCACAAGTAAGGTTTCCTGAGACCAAAAGAAGAAAAAGAATCTCAT GCTTTTCATGTTTCGAACAATCAGGGTGAGGTCTTTTTCAATCGATTTTT GGTGGGTTTTAGTCATCGCATCGCAAATAAATTTAGACAAGTTTTTCGTG ACACCCTGGACCCCTTTTGTTGTTGTACTACTAACTCAGTTGAAATACTA GCACTTTTTTCTGAACTACTTTACACATTCGTATGTGGACAAGCTTCAAA TCTTAGGTATTGCTTATGAACAGTTTGTGTAGCTTTTGAACCTCGATAAG CAATTTGATCTACTTAACTGTGATGAATTAAATATAGAAGAGAGAGAAGT TTAATATCCCAAGGGGGAGAAATCTTAGTGCAAATTCTGACCAATAAAAA ATGTGCTGCTGAAAGGACTAGATTGATCAAATGGGCTTTTCCAGAAAAAA TTTGAATATGGGGGGTGGAGGATATAACATTCTTTGGAAATTTACCCCCC GGATATTGTGACTTTTGACCCCCCCCCAGACAGCAGGGCTAACCCCCTGG ACAAGCATCAGTTGACTCCATGGACAATCAAAATTACCCTCAAACAGAGA AAGATTACCCCCTGGACAATGCAAATCTTGTAGATTTTTCACTACCCCCC GGCCCGGGCATTATATCCTCCATACCCCCCCCCCATGTACGGACATTTTC GGGAAGAGCCGAATGCTACCATTCATAACGAACCTATCATGTTATGAAAA TAATGATCAGAAATAAATTTTGACGCTTTATGTTATTCTTATTTGATAGG GCTTTTCATAAATTATTTTGAGTGCAACGACTGTCTCGTTTTAAAACTAT TACCAAGGTGATTAAATCCCACAAGTCTTCTTAAGTGTTACTTTTAGAAA TAGAGTAAATTTCTTACGAACTCCTTTGGGATTTGATTACTATATGCGTA CAAACTTTCGCGAGCAGAAAATTCGCGATTTTCGCGAATTTTAGCCCTTT TCGCGAAAGTAAATGTCTTTAAAAATTCTAGGAAGGGTCATTCGCGAAAG TTTATGCTCGCGAAAAATTCTTGACAAAATAGAAAATCTGTAAAACTTTG AATAAAATGTAACTTTTATGGCACTTTTTAGCCTGCTAAATGACTAAATG ACTAGTAAGTCAAAGGACAAATGTTTCAAGCCAATCCAAGAAGTATTTGT CCCTCTAAGCCAATTTTTCATGTGAAAATTCTTAATTTTATGTCTTGATT TGCAAAAGTTTGTGCACGCGAAAAATATTTTTTCGTTAAATTTGCGAAAG TAAATGTCGTGGATTTCGCGATTTTTCGTCCTCGCGAAAGTTTCTGCTCG TGAAAGTTTGTACGCCTAAAGTAACTGAAATTTTTCGTTCACACTGTAGT GGCTGCAGCACTACAGAAACAAATTTGCCAGGATGAGATGGTGGGTGACT CTAGAGTGGCAAGGAGAGCTTACTCCAGGATCCGCACCTGTCTCCAGGCA CCCCCTTGGTGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAAGATCTT CTGCTACAGCAGTCTTCATTGCATAAAATCTGCAATTCTAGTCTATTTTC ACCCCAAAGACATTCTACCAGAATTTTTCTCCCACAGCTCTATTCAATTG CACAGTCTTGGGGCGCTCAAGTCTACCAAATAAATATGCAAATATTGTGC ATACTCCACCTCCAAAGCACAGAAAGTTCTTTTCTTATTTTAATTTTCAA TTTTTCACACAGACTCTACATATTCTCACCTTTAACTCTCTTGGCCTTGG GATTTTTCCAAAAGCCGATCAAAATAAACAATTTTACATACTCCACAAAA TACTTCACTTACAAAACATCCTCATTGATATAACTTTGAAACATATTATA TTCAACAAACTTTGAAACCTCAACAATTCTGGTTATTTTCCGTATTTGCA CCTAAATTTCAAAAAACCTTTTTAATTTTATCCCTTCTCCGAATGTCACT TCCTAGGGAGGGTACCCATCTTTCCATATTCACACATCCACAAGCAGCAT TAGGATAACGATCGCAAATTTCCCGAAATATCACACCATTCTCTATCCCT TTGGGAGCAATCCTGAAGTGATGGTCCATGATGGGATATTTTATAAAAAA ACGTGAAAGTTTGTACGCCTAAAGTACCATAAGCAAACCTTCAAAACGAG GTAAGCGTTGGTCGTGACGTAATTTACGAAAAGATCTATTAAGCCCTTGT TTTCCATTTAGATGACGTCACATTCTGCACAAGGCCTTTTCCACATTGGA CAATCAAGAATTTTGTGAAAGATCTGGAGCTTTTGAAAGAATTGAAAAAC GATTTATTAAAGTTGAAATTCAAACACAAATATACTGACTTGTTCAAGTT TTCACAGGTAAAACACGCAACGTTTTTGTGAGCAGTGCTAGCCCTTCACC AGGCGTTTCAATGAAGTTCATCTTTTATTGATAAATTTGGGTATTTTAAC GTTTTTCAGAATTTAATTCCAATACTTCCATTTTATTTCATTGGATATTT TCGATTTTGGAGAGATTCAGTGGTTAGGCTATATTCTCTCAGCCTTATTG GAACACTTTTGAGCTTTCGGATCCTGAGATCTGACTGTGTCCCATATTAT AACTCAGAGTCAAAACATTGCATTCCAGTAGTAACTTAGAGCGCTTAGCA CCTTAAAATCATTTGTATTGTTTTGTAGGGATTCCCCCTTATTATCAAAT ATAATACGATTTTCATTTTAGACATAAAAACATCCGAAGCCCTCCATCCA TCTTAGTGTATTCATGATATGCACCACTGCAATGACTTCACGAAATGATG CAACTTTTCTGTTTTTGTTCCACCCAATACGTCACTTTTTCTATTGTTTA AGTGATGTATTGGGTGGAAAATTATCTGGAAAGTTCTCGGAAGACTCTCC AGTGGTGCATATCATGAATACACTAAGATGGATGGAGGACGATACGTCTG GTGACCTTGGACAGGAATCTACACCTTCTTTTTTCTTTCTGCAGAGTGAA GATATCAAAAATCGAAAAACACATTCCATATCAACTTTCAGGTTTAATTC ATTCAAAATTACAACCTTTTTGTCAAGAAATTTCCCGAAATGTTTTCGAC TTTTTTGTTACAATATTTGAGTGTATTTTTCCGGGGAAAACAGAGGGTAT GTGATGCCAAAGATAGAATCTTCCATCAAAATCATATACAGTGGAGTCTC CGTAACTCGAATGTCTCCGTAACTCGAACAAGGTTTCATGGTCCCTTCAA TTAACAATGCCTTATAAACCTTATTCCATATCTCTTAATTCCCTTAACTC GAACAAATTTAGGTTCCCCGTTCTTTTTCGAGTTATAGAGACTCCATTGG ATTTCTATGACAAGTTCTATGACAAAAAAGTTACATTATTTAGAGTTTCA TACTCCCAGAAATTGTTAGATGGTGAACAGGTTATTTCTTCAATAATCCA AACCAATTTTTATATAGATTTAGTACAATTCATATTTTTTAAAGTTACAA TTTACAAAGAACTTTCAGTGCAGTATAAAGAGAGGTATTTTCCGTCTCCA AATTCAACAAAATTCTGCAAAATTTGAAGAATCTTGCTAATTTGCAAGTC AATTTTCGGCTGATACAAAAAACTTTACTTTGACCTCACGTAAAGTAGAG ATATTCGTTCAATTGAACATTCTTCTTATAGGGACTGTTTGTTTACACAA TTTCGAGGATGGTTAGAAAATGTTTTGGATAGGAAAATGTCGGATGCGAT AGATATGTCGTGCGCTCAATATAATTATACAGGTACGATTCAACTTTCCA TGAAAATCTAAGTAAAAGTAATAGTAATAACCTCGTTAATTTCCACTTGG GTTGGGGCACTCAAGGCATGGATTTAAAACAACTATAAGGTACGATTTAA CTTTTCCATGAAATTACAAGTGTATATTTTGTCCCGAAATCAACCTGGGA GTTTTGCCTTTAAAAAAACAAATAGTAATTCTCAAGATAAGCAATGTTCC GTAAGTGCAAAATGAGAAAAAATGAAAAAAAAGTGCACAGGGTTTAAAGA GTGAGCAAAATTTTAGAAAGATCTAACCAATTTGTGCCTTACAATGGACC AAAACTTTCAAGCACTGCTATGCAAATTTACTAGAATTTGGCTAAATTTT GTTTGCGTTGTAAGGGTCCAGTTTTGAGACCCTAATTTTTGTCCTCGGTA TTTTTTTACTACAGCAACAGAAACATTTTTTTTCAGATTTCTTACTGTGT CACGACGATAAAGTTGAAGATCGACAAATTGCGTTCATTTTTTATATGGT GCCCGATGATTGGTCCAATGAAGACGGGGGTATGTTGTTTTATTAATTTG AAAGCTTTTTGATATTGAATTGACACGGATGTGGAGCAAGATTGGTCAGA AAGAGGAAAAGAAAAACTTTTTTTGCTTATATCAGCACAATATAACAATA GGGCGACACTGCCCTGATATGAAACGGGAACACTTTTTATGTGAAAATAA AACTTTTACTGAATGCATGTCTTATTGCATATTTCTCGTCATTCCCACGT GGTTCTTGATTTTGTTGATCCGAACCATGATGCGAAATGGTTTTAAAGCA ACCCACGTATAGAAACCCCCTTTTGAAGTGAAACTGTGGGTGTGATTTTG TATAATGATTGATTTCGTTTTTTCAGGAAGATTGGATCTATTCAACAATA AAGGTATATATCATTTCAGCTCCTACATACTAGCTTTTGAGAAATTACTC CATTTTATTGTTACCCTAATTTCAAATCTTACTTTGAAAAGTTCTTTACT CTAGTTTATTGATACCCTCATAAATCTTCATTTTCAATACAGTTTTCAAA GATTTTTCGTAAAACTTTTTCAACAACATTCTTATATTGTTACTTTCAGA ACTAAAGTGGGTCATGTCTGGCCAGTGTTTTACGAGTAATTCAGTTTTGC ACGGTGTCATGTTTTGTTTTTTCAGATGGTCAACCTTCAGATTTACACAA ATCACTGATTCCATCTTTTAACTCTTTGGTATTTTTCGAAGTCAGCGATA CATCCTTTCACCAGGTGAGAAGGTTCTTTCTGACCTCTCTTGGCCTGGTT CCTCTCTCGCCCTGGTTTCGCCAATCTCTAAATTTGATTAATGTTCCAGC GCCTGGCATCACCTGTATGATGAACTACCTCTTTATGGAACTTTCTACAA TTACCTTAAAATGAGAAAAATCGGTGGATTTACCTGGTCAAACTCCTACC AAATTTATTAATTTATCCGTGCTTTTTTAGGCTTTTAGTTTATCTAATAA CGATTTTCGGCTAAAAATATCCTGCAAACACACGACCAACCATCCGCCGA ATTAAATTCCTGCCCAGATTTCTTCCTTTCAGGTAAAAGATGTACCAACT TTGACTCTCCTTAGGTCTCCGAAGTGTTATCGAACTCGAAGACACGTCTC TCCATCTCGGGATGGTTTCATTCGACCACTGATCCGCATTTTAAACTTTT CAAACACGTTGAAACAATCACAAAAACACCGCCACTAGATTTAGAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070087TCONS_00070087Clytia hemisphaericatranscript
TCONS_00070086TCONS_00070086Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070086-proteinTCONS_00070086-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:4983..11529 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.69 11.89 3.36 2.03 1.72 1.5 3.46 3.56 5.95 4.37 7.96 9.96 6.91 9.02 10.13 8.92 8.6 10.22 4.43 2.69 9.89 9.99 16.34 14.08 4.62 10.7 5.85 6.22 9.6 10.69