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Sequence
The following sequences are available for this feature:
gene from alignment at scaffold_55:365243..369450- Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043847 ID=XLOC_043847|Name=XLOC_043847|organism=Clytia hemisphaerica|type=gene|length=4208bp|location=Sequence derived from alignment at scaffold_55:365243..369450- (Clytia hemisphaerica)
TTTGGAAAAATTTGATGACGTCAGCAAAAAATTGCATTTTTCGATTTTTT
GCATTTTTTGCTGACGTCATCAAAATTNAGTGCATTAACCATGAATGAAA
TTAAACTTTTTCACACAGGCATCCCAGCATCAGGGATCTTGGACGAAGCT
ACGGTTGAGTTGATGAAGACACCTCGTTGTGGAGTGAAAGATGTGACAGG
AAGGTTGAGTGGTGTCAAAAGAAAGCGAAGATATACCCTTCAAGGATCCA
AATGGATGAAAAAGGTAAGAATCAGTAAGCAAACAAAATGTCTTTTAAAC
ATACATTACGATATCGCTTAGAAGGAAGAAACTCTCGTTATGATGAGATC
TTAAGAACATTATATGTTTTTTTCAATACCGAGTGGTTTTTCACGGTAAA
ATTAAATATAGGCAATAGGTAAGTGCAAGGAAAAAATTTGGTGGCAAGGG
AGTTTTGAAAATTTTTAACCAGCTACCCATCATCAACTTTGTATCAACTT
CCAGCGCAGCTCCTGGTTTAGTCAAACGGAAATTCATGCATATAGACACT
CGAGTGACTTAGGGCAAGTCTCAAAAACCTAACGGTTTACCCTAAGTTTT
CGCTACCAATAGCAGCCAGATTCAGAGATCCACTTAGGGCTCTAAAGTGC
CTCTATACCTTAAGGTTTCAGAACCCGGTTGTTACGTAATTAAATATTAA
CCTAAAAATTAATTATCAAAGAAATTGTAATCATGACATCATAATTTGGT
CGAATTTGGTGACGTCATGAATCGTATAATCGCTATAATATTAAAAATAC
ATGTCCAATCTTTCCCAAATTTGAACCAAAGATGCATCTAACTCAAATGT
AACTTTTTGAAAAAGAAAATTTGGAAAAATTTAATGACGTCAGCAAAAAA
TAGCATTTTTCGATTTTTTGCATTTTTTGCTGACGTCATCAAAATTTTCA
AAGAATTTTTTCGTTGAAAAGTTCGGCATCATTAAGATGCATCTTTGGTC
CAAATTTGAGAAAGATTCGACATGTACTGATAGAGCTAGAGCTAATTTAC
GATTTATGACGTCATAAAATGATGACGTCATAATTCACACTTTCTTTAAT
AATTAATTTTTAGGTTAATATTTAATTACGTAACAACCGGGTCCTGTAAC
CTTAAGGTATAAGTCATCTAAAAATCCATAAGTGAATCCCTGAGAATGGG
TGCTATTGGTCGCGGATTCGGGATTTGTGATTTTTAAAAATCTAGACACG
CACTAACTCACCCGAGCAATAACTTCATTCCATCTTTAGGATTTAACCTG
GAAGTTAATCAACGACAATAACGACGGGTTAACACGTCAACAAGTCGAAG
ATGTCATGACTCAATCTTTCGATAAATGGCACAAAATCACCAACTTGAAT
TTCAAAAAACTTGAACACACTGATGCCACTGAAGCTGATATTGTGGTCAA
GTTTGGAGTCGGTTCCCATGGCGATCCTTATCACTTTGATGGACGCGGTG
GAACTCTCGCGCATGCGTTTTACCCTCACAACAATCTAGGTTTGTAAATT
TAAACATAAACTTTTTTTTTGAAGTTTTCTTCTTTGTTCTTCTCATCGTC
ATTTCGATTATGATCTTGTTGATTATGGGAACCTTGTCCTTGTGATCGTT
AACGGTTTTGAGCAACTTTATTGAGATCGTTTGGTAAAATCAAAGTTTAT
ACATCTTACATTTTTGGCTTTCCATTTAACTTTCACTGTATTTCTCACAA
AAATCTGACGACCTGGTTTCTATTCAATAGGACTTTCAGGGGACGTCCAT
TTTGATGATGATGAAGTTTACACGATCGGTTCATCGCAAGGAAAAAGTTT
ATTATGGGTTGCCGTCCACGAGGTGAGTTCACTGTCAAAGTCTTTGTGAA
AGCGATCTTTATTTACACTTCAAGAAGCTTTGAATTCTCAAAAATTTACC
ATAACCACACATCGCTATTTGGTACCCTTAAAGAAAATACAGTCATGTGA
AAATATCAAATATCGCATTTATTTTAACTTGACCGATCAAAATAGGCTAA
AACAATGAAATATATTCATAAATCTTTTTAGATTGGCCATTCTATTGGAT
TGGAACATTCGAATCTTCGTGAAGCAGTCATGTATCCATGGTATCGAGGA
AATGGCGGACGTGATTTTGATTTGAATGAGGATGATGTCATTGGAGCTCA
ACATATTTATGGTAAGGTGATGTTTGGTCGTTCTAAGAAGCTTTAGTTTA
AATTAAGAGCAGGAAATAACTATGAATTGGGATGGCCAGATCAAAAATTT
AATCGCATTTTCATCTAACCAAGGAATATAATTTCAAAATTTCATAAAAA
TTAAAATATTGCATTTCTTCTAAAATTCCACTTTTCACAAATAGGATCAA
GATCACCAGACCCAGAGGAATCAAAAACTACAACAACAACCACCCTTGCA
CCTGGAGAAACAACGCCCTCCCTTCCACCCTCAGTTTGTATCAATCAATT
CAAAGCCGCCATTCTCCACAAAAGCACTGGCAAAACGTACATCATCAACA
ACGGTTTCGTTTACACCCTCGGAAAACAATTAGGAATCGAATCAGGACCG
ACTCCAGTGAAGGAAATTTTTCCGGGAGTCTCGAATATTGATTCACTTTA
CTACAACACTGATGAAAACATTGTTGTTCATGATGGTAAAAGGTAATTTT
TCAGACAATTAGCCAATTAGCCATATAATCACTGCCTTTTAATCTCTTCA
AAAGAAGTACCTTGAGCACCACAGCTCAGCTTTCCTGAAATCCAACCTGT
GGAGACGGACCATATGAGTTTTCTAATATTTATACTGACGGCACAAAAGA
AAACCTTGGTTACTTTCGCAGCTTCATTCAAAGTCAACAACTTAAATTTA
TGACATTCATGACGTAATGTTTACAGAAATACCCCGGTTTTAGCCAGTAG
TGGCACATTTAAACTAGACAAAAGTTGTATAAAATTTGCCACTACTGGCA
AAAACCGGGGCCTTTCCATAGAAAACAATACGCCATGAATATCATGAATA
GCCCTAAAAGAAATCAGCCTAATATTTCCTCATTTTTCAAAATTGACAGA
TATTACACATTCAATGACATTAATGGAAGAATGATAGAATCGGGCACCAT
CCAAAACAAATATGGCCTCTCTGATGACGTCAACAAGATCGATGCCGCAT
TTATTTGGATTGGCAATGGACGCGTTTATTTGTTTGTCGATAAAATGTAT
TATCGATTCGATGATAATCGAGCAAGTGTCGATTATGGATATCCGCGAGT
CATTAAAGACAATTGGAAAGGTTTATCGGAAAGTGTGGATGGAGTATCAA
TTTGGAGAAACAGAGTAACTTATTTCTTTAAAGGTAAGAGATGGGAGCTG
GGTTCTTAACTTAGCAAGTCTTAAACGCGCAATAAAATTTATTACAAACG
TGTTAAAAAACTTCGTGTAGTTTTAAAGTGTTTTATATAATTAACGTGAA
TTTCTAAAGTGTCTAACATTTATCCGAAAGATGAAAAATATTTCACTCTG
AGACACCATGCTCAGCTTGAGTCCACAACTATTGAATTACCAGACAAAAT
ATGATATTTGGTTATAGAGGACCATAACAGTGTAAGCTGATTTTTTAGGG
TCCTTTTACACGAAATTTTATCATTAATTTTTCAAATTACTCTAATTAAA
CCATGGCTTATATTTTGAATTCATCATATCCGTTTTTTTCATTAGGCAAT
TCATACTACCGCTTCAATGATAAACGAATCCGTGTCGAAGATAATTACCC
AAGACCCATCAACCATATCTGGACGCAATGCACTGTAGCTAAATTAAATA
CCCAGAATGCTTCAGTGACATCAAAAGCTTCTATTTTGGTCACCTTTGGA
ATGTTGGCAATCATGAAATTCCTATTTTTGTAAAGTGCTAGATATTTTTA
AATTGTCCATTTGTTAATGTGTAAATTTTGATAATTTTTAGACTTTCTAT
TTTAACATTATTTATTTTACAGTGATTTCTATAAGTGGTAAATTATTCTT
TCACATCCATATTTGTAAACGCTATTTTTATCCAAAATCTTTATTTTTAT
CCCATTAATCAATTTTTTATATAGTATAAGAATTGATAATCTTTATATAC
CGATTTTATTGAACATAATATCATAAAAATCATGACTCCAAAACTTATTT
ATACCTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_55 | supercontig | scaffold_55:365243..369450 - |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| MMP27 | matrix metalloproteinase-27 precursor | Homo Sapiens |
| MMP8 | PREDICTED: neutrophil collagenase isoform X2 | Homo Sapiens |
| MMP3 | stromelysin-1 preproprotein | Homo Sapiens |
| MMP1 | interstitial collagenase isoform 1 preproprotein | Homo Sapiens |
| MMP10 | stromelysin-2 preproprotein | Homo Sapiens |
| MMP12 | macrophage metalloelastase preproprotein | Homo Sapiens |
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