TCONS_00003094-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003094-protein
Unique NameTCONS_00003094-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003094-protein ID=TCONS_00003094-protein|Name=TCONS_00003094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=155bp
MEIQNANPTVYEKAKLRNITAEEEDEEVNDPIDSREIFDIIRNINDPEHP
LTLEQLNVVEEKNIDVDDDKSYLKIMFTPTIPHCSMATLIGLSIRVLLLR
SLPTRYKVDVLISPGTHVSELAVNKQLADKERVAAALENVHLLNVINQCL
AIDKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001716XLOC_001716Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003094TCONS_00003094Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002744MIP18-like
IPR034904FSCA_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002744MIP18 family-likePFAMPF01883FeS_assembly_Pcoord: 35..111
e-value: 9.4E-15
score: 54.4
IPR034904Fe-S cluster assembly domainGENE3D3.30.300.130coord: 27..118
e-value: 4.8E-36
score: 121.9
IPR034904Fe-S cluster assembly domainSUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 31..132

Blast
[Close]
BLAST of TCONS_00003094-protein vs. Swiss-Prot (Human)
Match: MIP18 (Mitotic spindle-associated MMXD complex subunit MIP18 OS=Homo sapiens GN=FAM96B PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.320e-75
Identity = 104/149 (69.80%), Postives = 127/149 (85.23%), Query Frame = 0 
Query:    3 IQNANPTVYEKAKLRNITAEEEDEEVNDPIDSREIFDIIRNINDPEHPLTLEQLNVVEEKNIDVDDDKSYLKIMFTPTIPHCSMATLIGLSIRVLLLRSLPTRYKVDVLISPGTHVSELAVNKQLADKERVAAALENVHLLNVINQCLA 151
            ++NANP +Y+++  R +TA EEDE+V D ID+REIFD+IR+INDPEHPLTLE+LNVVE+  + V D +S + + FTPTIPHCSMATLIGLSI+V LLRSLP R+K+DV I+PGTH SE AVNKQLADKERVAAALEN HLL V+NQCL+
Sbjct:   12 LENANPLIYQRSGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERVAAALENTHLLEVVNQCLS 160
The following BLAST results are available for this feature:
BLAST of TCONS_00003094-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIP184.320e-7569.80Mitotic spindle-associated MMXD complex subunit MI... [more]
back to top