Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00003960-protein ID=TCONS_00003960-protein|Name=TCONS_00003960-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1708bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00003960-protein vs. Swiss-Prot (Human)
Match: MARF1 (Meiosis regulator and mRNA stability factor 1 OS=Homo sapiens GN=MARF1 PE=1 SV=6) HSP 1 Score: 229.565 bits (584), Expect = 2.550e-60 Identity = 120/241 (49.79%), Postives = 162/241 (67.22%), Query Frame = 0 Query: 283 PIGVFWDIENCQVPKGKSALAIVQKIRKTFYPGCREVEFMCVCDTTKEKKEVLEELNRSQINIIHINATSKNAADDKVKQALRRFGQTHTPPATIVLISGDINFISELSDLRHRNNIKVILLHNQQASTVLKQTAHECHAFEHFTAGI--QSSTTNTACNDGPKEILVSNLPQGNKQFKNKINTKLKLLVDNTGGKITHLQVTEDSNKEFDNIAIIRFADAETARRAVSRLQNEVIFGAKI 521 PIGVFWDIENC VP G+SA A+VQ+IR+ F+ G RE EF+CVCD +KE KEV++ELN Q+ + HINAT+KNAADDK++Q+LRRF THT PAT+VL+S D+NF ELSDLRHR+ +IL+H QAS L A+E FE F + + + C+ + V NLP NK K+ ++ +L+ L DN GGK+ L +T S AI+RF + ++A RA R++NE +FG +I Sbjct: 352 PIGVFWDIENCSVPSGRSATAVVQRIREKFFKGHREAEFICVCDISKENKEVIQELNNCQVTVAHINATAKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHGFHIILVHKNQASEALLHHANELIRFEEFISDLPPRLPLKMPQCH---TLLYVYNLP-ANKDGKS-VSNRLRRLSDNCGGKV--LSITGCS-------AILRFINQDSAERAQKRMENEDVFGNRI 578 HSP 2 Score: 103.99 bits (258), Expect = 5.262e-22 Identity = 122/546 (22.34%), Postives = 235/546 (43.04%), Query Frame = 0 Query: 838 VVEILKTHNRKVPVASLPGLYWSYTK--QTFADAQEGLTLTELVTS-DEISLTGSSPQDQAMCFKREKPKKDQFHP-------------LEDFRNDAIQLIKASPLFTVPINRVAPLYHQYFGRQLVLAEYGFKEMSEIFKAFPDIFKI---EQNKTIIFT-KAYTKFLLQELLHHLLFTRHRHQLPVSSLLTTFYRFHGYKLYYRNFGFDSFLDLVNSLDPEIFRIAGTGENKTLSLIRKSVKPDKDIIKT--FANEVQQLVQNSPNKRVLIHSLSSDYFKHFGRQLKLNDLGFNKLNDLIAAISNYFEIKGDRDGRYITFPRKGHDFETMLVELQTILNKNPDLLMLGIQLPDVYKKTMKKDLPIEP---ANLNHLYEKLPSSISVIGQNSHRLLLYNNRADYPSLLFTEQMLELAYNCPHFEFTVQSMCEKMKE----------KGIEASLERVSREIKKCDKFKVKASTSGKDSYREKTYWIAPEESQKLFERDVLRLLYKEPDFKLPLNHVAKAFTKTYGKVLRVADFGVNKLAQILEKLP 1348 V +L+TH VP+ S P Y + + + Q G+ L +T +++ + + + + KP P L F + I L+K+ P +PI+ P YH +F +Q +++YG+ ++ E+ +A P + +I + + T +A K Q+LL LL ++ Q+ V ++ +G +D+V+ + P+ +N+ + I K + +I +T F+ +V L+++ P+ R+ + Y HFGRQ KL GF KL +L AI + ++ + + +T + F+ + + +L D ++ L Y KT ++ ++++ L +KL + V S R + NR SL T Q+L L + +E T E++K E ++ E+ K + V+ T+ K E+ + S LF ++V LL+ ++ L+ + A+TK G+ L+ +G + + ++L +P Sbjct: 1011 VHSLLQTHEGTVPLLSFPDCYIAEFGDLEVVQENQGGVPLEHFITCVPGVNIATAQNGIKVVKWIHNKPPPPNTDPWLLRSKSPVGNPQLIQFSREVIDLLKSQPSCVIPISHFIPSYHHHFAKQCRVSDYGYSKLIELLEAVPHVLQILGMGSKRLLTLTHRAQVKRFTQDLL-KLLKSQASKQVIVREFSQAYHWCFSKDWDVTEYGVCELIDIVSEI-PDTTICLSQQDNEMVICIPKRERTQDEIERTKQFSKDVVDLLRHQPHFRMPFNKFIPSYHHHFGRQCKLAYYGFTKLLELFEAIPDTLQVLECGEEKILTL-TEVERFKALAAQFVKLLRSQKDNCLMMTDLLTEYAKTFGYTFRLQDYDVSSISALTQKLCHVVKVADIESGRQIQLINRKSLRSL--TAQLLVLLMS---WEGTTHLSVEELKRHYESTHNTPLNPCEYGFMTLT-ELLKSLPYLVEVFTNDK---MEECVKLT---SLYLFAKNVRSLLHTYHYQQIFLHEFSMAYTKYVGETLQPKTYGHSSVEELLGAIP 1541 HSP 3 Score: 92.0485 bits (227), Expect = 2.381e-18 Identity = 88/396 (22.22%), Postives = 164/396 (41.41%), Query Frame = 0 Query: 748 PDLLNANDP-----LMKLKIEVFELLFESNYQWVPLNEFLVRYKTSHKKALHVLDLDRVKDLIYVDGKPQLQFVCLLRNSAGQRKVKLT-----PNLKKSVVEILKTH-NRKVPVASLPGLY-WSYTKQTFADAQEGLTLTELVTSDEISLTGSSPQDQAM--CFKREKPKKDQFHPLEDFRNDAIQLIKASPLFTVPINRVAPLYHQYFGRQLVLAEYGFKEMSEIFKAFPDIFKI---EQNKTIIFTKAYTKFLLQELLHHLLFTRHRHQLPVSSLLTTFYRFHGYKLYYRNFGFDSFLDLVNSLDPEIFRIAGTGENKTLSLIRKSVKPDKDIIKTFANEVQQLVQNSPNKRVLIHSLSSDYFKHFGRQLKLNDLGFNKLNDLIAAISNYFEI 1126 P LL + P L++ EV +LL +P++ F+ Y K V D K + ++ P V + +R + LT + ++++LK+ +++V V Y W ++K L ++V+ + S QD M C + + +D+ + F D + L++ P F +P N+ P YH +FGRQ LA YGF ++ E+F+A PD ++ + K + T+ L LL ++ + L ++ LLT + + GY +++ S L L + ++A + + LI + K + A + L+ + + L Y L + GF L +L+ ++ E+ Sbjct: 1086 PWLLRSKSPVGNPQLIQFSREVIDLLKSQPSCVIPISHFIPSYHHHFAKQCRVSDYGYSKLIELLEAVPH---VLQILGMGSKRLLTLTHRAQVKRFTQDLLKLLKSQASKQVIVREFSQAYHWCFSKDWDVTEYGVCELIDIVSEIPDTTICLSQQDNEMVICIPKRERTQDEIERTKQFSKDVVDLLRHQPHFRMPFNKFIPSYHHHFGRQCKLAYYGFTKLLELFEAIPDTLQVLECGEEKILTLTEVERFKALAAQFVKLLRSQKDNCLMMTDLLTEYAKTFGYTFRLQDYDVSSISALTQKLC-HVVKVADIESGRQIQLINR-----KSLRSLTAQLLVLLMSWEGTTHLSVEELKRHYESTHNTPLNPCEYGFMTLTELLKSLPYLVEV 1472 The following BLAST results are available for this feature:
BLAST of TCONS_00003960-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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