TCONS_00047234-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047234-protein
Unique NameTCONS_00047234-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length181

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047234-protein ID=TCONS_00047234-protein|Name=TCONS_00047234-protein|organism=Clytia hemisphaerica|type=polypeptide|length=181bp
MSEAGGTTNEVNELNNSLLEENKDKSKTVSVSNKKEEVDDLSPSSSDNIK
KQVPESNNIKTSNGSIPKDKVALKLILASGKSAEFIFPHFASVGKVTEFV
YKNWPEEWADEKDSITSHHVLRLIYQGRFLHENVTFVALNLTPGKRTVMH
LVPREKLPQLSPDDIEKSPKTSERSCCCNII
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030087XLOC_030087Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047234TCONS_00047234Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13881Rad60-SLD_2coord: 69..177
e-value: 3.3E-20
score: 72.1
NoneNo IPR availableGENE3D3.10.20.90coord: 54..160
e-value: 2.3E-7
score: 30.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 62..168

Blast
[Close]
BLAST of TCONS_00047234-protein vs. Swiss-Prot (Human)
Match: UBL3 (Ubiquitin-like protein 3 OS=Homo sapiens GN=UBL3 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.765e-32
Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 0 
Query:   66 IPKDKVALKLILASGKSAEFIFPHFASVGKVTEFVYKNWPEEWADEKDSITSHHVLRLIYQGRFLHENVTFVALNLTPGKRTVMHLVPREKLPQLSPDDIEKSPKTSERSCC 177
            +P D + L+LIL SGK+ EF+F    S   + + VY NWP +W +E+  ++S ++LRLIYQGRFLH NVT  AL L  GK TVMHLV RE LP+ +        KT E +CC
Sbjct:    5 VPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQ--VSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCC 114
The following BLAST results are available for this feature:
BLAST of TCONS_00047234-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBL31.765e-3249.11Ubiquitin-like protein 3 OS=Homo sapiens GN=UBL3 P... [more]
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