TCONS_00047328-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047328-protein
Unique NameTCONS_00047328-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length772

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047328-protein ID=TCONS_00047328-protein|Name=TCONS_00047328-protein|organism=Clytia hemisphaerica|type=polypeptide|length=772bp
MFGNHFGRRKSFHRHPSEANLPSCIIHDNHYVNWYDNRYNNYSRDFWGFD
HGPLTAFTCSFSSNNSNIYNVCFALEEQVSSYNASNSTGFESVAAFYEYD
GIKEEPKKRKKEKKVDEDAWKLNPIVQAIMKRDEEQAAANPKAIEVVSDG
DSWSTVEEETVCSSGVGDDDKFDEFVGEIKELNSFGDKSNDIDNYPTDGY
RSGGGVSLGIGLNDDIECQLLDSDSSSDENVDTETKKTERKDTASRFING
INLDTYDVDSGKIFSSVSCDIYQRDLDANASESNSGDSDIIEMGCFGKND
NIDYEQSTTAKKRRICFSNGEAKYESDDEINVVNCRCNGKNYKQLNVSNK
VKPGDQEIGDSPGNNSNEQELSNKSYVDEMNYNGIGDIDNTDEEDSFDEE
NESESEEPEEESDDWENMDMDTYCKRIMGDLIYPVTVFIDNTPLPLPRFS
KCQRFFTVLKAKTIDGLKCIKMLEKDRLEDGKDASVETFVLPCKGEGFVT
QNDVCMLAIGDLYAVTARRNVHTNDTLVFWKVALKRWTKDEMYLKYYWTL
EPNDYFSSSDFGASNRLQVIDYEFSSNGQCITLLMQNGFIFTVDIQRKHQ
VWQVYLPPGGDRMVKQLTLHPTLNATLVFAMKNECYSLDCSSKSQSWDMI
QSVIELPRDYIINYITFSQSRDLLSLCTGPEGDVFIYSVDKHQYNQLFKL
EHDTVASAIHCDFSWTSEELLVSYGDADYRIWQLPKHLKLKKIARIQFLK
LVRGCHINQLKLPNSLKEYLLF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030151XLOC_030151Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047328TCONS_00047328Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 513..759
e-value: 4.3E-10
score: 38.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..417
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 527..535
coord: 564..747

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047328-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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