TCONS_00047360-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047360-protein
Unique NameTCONS_00047360-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length388

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047360-protein ID=TCONS_00047360-protein|Name=TCONS_00047360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=388bp
MPGKAKKFPCPNPLFLEWLEEWKTEAEERGNNSKWTYIKAMNSLKKYPLP
LHSGQEARILENIGETIAKKLDKRIEEHLRDGGSREDLHRVEIEVEPAPK
RRRKKAKDPEDEFAQVPNSPNMKSPGRAYIPRFRSGPYALLITLYQESKK
PTYVGFLTKIELQNLAQPLCDASFTVPDPGSQYTAWSSMGNLLKKGLVLK
WSNPAKFNITSTGAELAERLLTGTDEMFQPEGSHEGLAGNTSMFSPPQPP
PTGSGRKKTTKAKNQPRERLPEPGEALLENLHNILNDLKGSKKSATTSSS
TNTKPHKSNNSSQSTSAASKSPSATIRAGGNHFVRLQESLDQRSKQKHQD
DTTTATCFSSNLQSNSSSYTPAYSPGKNGQKPTLNGTL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030168XLOC_030168Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047360TCONS_00047360Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010996DNA_pol_b-like_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.110coord: 11..86
e-value: 6.5E-13
score: 48.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..127
IPR010996DNA polymerase beta-like, N-terminal domainSUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 8..78

Blast
[Close]
BLAST of TCONS_00047360-protein vs. Swiss-Prot (Human)
Match: MUS81 (Crossover junction endonuclease MUS81 OS=Homo sapiens GN=MUS81 PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 6.184e-33
Identity = 87/250 (34.80%), Postives = 129/250 (51.60%), Query Frame = 0 
Query:    3 GKAKKFP-CPNPLFLEWLEEWKTEAEERGNNSKWTYIKAMNSLKKYPLPLHSGQEARILENIGETIAKKLDKRIEEHLRDGGSREDLHRVEIEVEPAPKRRRKKAKDPEDEFAQVPNSPNMKSPGRAYIPRFRSGPYALLITLYQESKKPTYVGFLTKIE-LQNLAQPLCDASFTVPDPGSQYTAWSSMGNLLKKGLVLKWSNPAKFNITSTGAELAERLLTGTDEMFQPEGSHEGLAGNTSMFSPPQPP 250
            G+ +  P CPNPLF+ WL EW+ EA      +++ + KA+ SL++YPLPL SG+EA+IL++ G+ + + LD+R++ H   GG          E  PAP+ R  + +D       VP  P     G +Y P   SG   +L+ LY+E   P    FLTK E LQ  AQ     +     PGS    W ++ +LL + LVL+   PA++++T  G ELA++L              EGL+       P +PP
Sbjct:    8 GRKRPLPACPNPLFVRWLTEWRDEATRSRRRTRFVFQKALRSLRRYPLPLRSGKEAKILQHFGDGLCRMLDERLQRHRTSGGDHAP-DSPSGENSPAPQGRLAEVQDSS---MPVPAQPKAGGSG-SYWPARHSGARVILLVLYREHLNPNGHHFLTKEELLQRCAQKSPRVA-----PGSA-RPWPALRSLLHRNLVLRTHQPARYSLTPEGLELAQKL-----------AESEGLSLLNVGIGPKEPP 235
The following BLAST results are available for this feature:
BLAST of TCONS_00047360-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MUS816.184e-3334.80Crossover junction endonuclease MUS81 OS=Homo sapi... [more]
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