Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00047980-protein ID=TCONS_00047980-protein|Name=TCONS_00047980-protein|organism=Clytia hemisphaerica|type=polypeptide|length=765bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00047980-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.453e-49 Identity = 110/313 (35.14%), Postives = 153/313 (48.88%), Query Frame = 0 Query: 2 NWLFSIFLTIFMLSSVQCKAGWSGWSEWSSWGKGLCSGNKRIKTRSCTNPLPTSGNY-CHG-----ENSRKEDGPIDGGLSDWTQWSTCEKPCGGSIVNRTRVCDNPPPSRGGSQCFGKTVETKMECVMPCPESKTDGSWSPWSDWSSCPKQCTRNGGSLIKRYRQCNMPPPMFGGKPCPGNSTEEIIGCFDVCPVDGGFSQWSSFTPCSRSCGTGFKSRYRLCNDPVPQGSTAQNCTGAFNEAKHCRLAICEGAVNGKWGSWSQWSSCSQNVECFKGVRSRKRSCSNPAPSKGGDDCLGSADETEICPKTNC 308 N + S+ + + ++ VQ G+S WS W + C + ++R C PLP +G C G N + + P+DG S+W+ W C + CG RTR C+NP GG C G VE M + PCP G+WS W W +C + C G R R CN PPP FGG C G T+ + CP+ G ++ W+S++ CS SCG G + R R C+DPVPQ + C G+ ++ C C +G W WS W +CS+ C G R R+C NP PS GG C G + + C C Sbjct: 4513 NLMGSVLVRVPVI--VQVHGGFSQWSAWRACSV-TCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCP---VHGAWSAWQPWGTCSESC---GKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYG-GRKCEGSDVQSDFCNSDPC--PTHGNWSPWSGWGTCSRT--CNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMC 4811 HSP 2 Score: 183.726 bits (465), Expect = 9.677e-48 Identity = 103/291 (35.40%), Postives = 141/291 (48.45%), Query Frame = 0 Query: 26 WSEWSSWGKGL--CSGNKRIKTRSCTNP------LPTSGNYCHGENSRKEDGPIDGGLSDWTQWSTCEKPCGGSIVNRTRVCDNPPPSRGGSQCFGKTVETKMECVMPCPESKTDGSWSPWSDWSSCPKQCTRNGGSLIKRYRQCNMPPPMFGGKPCPGNSTEEIIGCFDVCPVDGGFSQWSSFTPCSRSCGTGFKSRYRLCNDPVPQGSTAQNCTGAFNEAKHCRLAICEGAVNGKWGSWSQWSSCSQNVECFKGVRSRKRSCSNPAPSKGGDDCLGSADETEICPKTNC 308 WSEWS W + C + +TR+C NP P GN P+ G S W W TC + CG R R+C+NPPP+ GGS C G + ++ CP G W+ W+ WS+C C GG +R R C+ P P +GG+ C G+ + D CP G +S WS + CSR+C G RYR C++P P + + C G ++ + C +C V+G WGSW WS CS + C G ++RKR C +P P KGG C G + C C Sbjct: 4589 WSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCP---IHGKWATWASWSACSVSC---GGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNP-PPSNGGRACGGPDSQIQRCNTDMC--PVDGSWGSWHSWSQCSAS--CGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQAC 4868 HSP 3 Score: 164.851 bits (416), Expect = 1.257e-41 Identity = 92/241 (38.17%), Postives = 122/241 (50.62%), Query Frame = 0 Query: 25 GWSEWSSWG--KGLCSGNKRIKTRSCTNPLPT-SGNYCHGENSR-----KEDGPIDGGLSDWTQWSTCEKPCGGSIVNRTRVCDNPPPSRGGSQCFGKTVETKMECVMPCPESKTDGSWSPWSDWSSCPKQCTRNGGSLIKRYRQCNMPPPMFGGKPCPGNSTEEIIGCFDVCPVDGGFSQWSSFTPCSRSCGTGFKSRYRLCNDPVPQGSTAQNCTGAFNEAKHCRLAICEGAVNGKWGS 257 WS W WG C + + R C NP P G+YC G ++ + + PI G + W WS C CGG RTR C +P P GG +C G V++ PCP T G+WSPWS W +C + C NGG + +RYR C+ PPP GG+ C G ++ D+CPVDG + W S++ CS SCG G K+R RLC+ PVP + C G + C + C G GS Sbjct: 4645 AWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCP---THGNWSPWSGWGTCSRTC--NGGQM-RRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKG-GRPCPGDTTQVTRCNVQACPGGPQRARGS 4878 HSP 4 Score: 118.627 bits (296), Expect = 4.802e-27 Identity = 64/174 (36.78%), Postives = 85/174 (48.85%), Query Frame = 0 Query: 23 WSGWSEWSSWGKGLCSGNKRIKTRSCTNPLPT-SGNYCHGENSRKE-----DGPIDGGLSDWTQWSTCEKPCGGSIVNRTRVCDNPPPSRGGSQCFGKTVETKMECVMPCPESKTDGSWSPWSDWSSCPKQCTRNGGSLIKRYRQCNMPPPMFGGKPCPGNSTEEIIGCFDVCP 190 W+ W+ WS+ C G R +TR C++P+P G C G + + + P G S W+ W TC + C G + R R CDNPPPS GG C G + + CP DGSW W WS C C GG R R C+ P P+ GG+PCPG++T+ CP Sbjct: 4703 WATWASWSACSVS-CGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCP---VDGSWGSWHSWSQCSASC---GGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACP 4869 The following BLAST results are available for this feature:
BLAST of TCONS_00047980-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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