TCONS_00049584-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00049584-protein
Unique Name	TCONS_00049584-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	939

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00049584-protein ID=TCONS_00049584-protein|Name=TCONS_00049584-protein|organism=Clytia hemisphaerica|type=polypeptide|length=939bp
KMLRGAMSSTIPGIPWYRLTVIFLLVVSVYSFKYVKSDSKFYHTKNGEVE
YERDGKIYRIGRIDFNSVKIKGRPTATDDFKIPPNKMKNGKRHRRSASST
AESVKEKEQKRRSEYINKDGLEECLPMEYEDQPTNKAFVMNHDDKILWLG
VVIPIMETDFKINPRRGMTNFQSLRYAVELANAGMKSLLMMGGWTIRLRR
LYPSVNLGDPSLIRYGFKCRTSNVTAFYGPFYQDNYDVLAAMTHIYPITF
MSQSSSKENDDRLRYQFGKSKNQIHKYTLQTNPSTLFRNQVILDIILKFG
WNFVAVFHSSFYIGESTSDVIFLLDKSGICIPSTRLKGGIEGNTDENIKA
RIIELRENHPTLRVLLLLTDVADTRSVLKAIKELDLQNHFTLLFADRGVN
DIEVVRGYEDIAVGAITIEPVNFHEKHLEQLADFEQWMLKANPTNTRNLY
FHWYWEQTFECELNSHILDRMLTPDQRGTYQKKCTGDEQFQIGKGVYPDR
NLFRGAMDTVEAIVFTLYRMELISTQSCEWVTSNKDLINIWSKDGCDKCP
WNTTLCFNRFFEGVFPSINMLNYQRLLPDIGWSLKYNHPRDIPNASYEIS
NFIFTNGRYQSVPIGNWTIKVPAHETKVYFPTDVLKMNKPHMVIDTDRIF
WRNGSAPEGKCALDCAPGYTRLYYLSKREVRKCCWKCEKCDTHDIVVENK
CHRCDRFQTPNIIKNVCEPLPIYHITLFSNSFATVLGIASMLGIIIVIAF
GFILIYNNNKHVIKAAGRELSYCMLSGIFFLFISTILFLVYPSKSICIAR
FALPPMAQVVVYSSFLLKNIRLYRIFERYDRKVTQPYLISPKSQVIILLI
IMSFQIGFAFIWTYDGLPDVTRVLTSNEKQVMLMCTKTHKVRFVLNYFPA
IFIIAACCIYCYKIRGLPKTYNETKFYIFTAFCSFTLLR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031443	XLOC_031443	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00049584	TCONS_00049584	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR001828	ANF_lig-bd_rcpt
IPR011500	GPCR_3_9-Cys_dom
IPR017978	GPCR_3_C
IPR028082	Peripla_BP_I

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 844..867 score: 22.4 coord: 899..922 score: 29.04 coord: 167..182 score: 22.85 coord: 760..782 score: 40.49 coord: 805..826 score: 31.25 coord: 288..304 score: 31.99
IPR001828	Receptor, ligand binding region	PFAM	PF01094	ANF_receptor	coord: 221..445 e-value: 6.7E-15 score: 55.0
IPR011500	GPCR, family 3, nine cysteines domain	PFAM	PF07562	NCD3G	coord: 657..710 e-value: 2.4E-6 score: 27.3
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 744..936 e-value: 1.1E-31 score: 110.4
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 732..939 score: 27.449
None	No IPR available	GENE3D	3.40.50.2300		coord: 284..471 e-value: 2.1E-20 score: 72.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..113
IPR028082	Periplasmic binding protein-like I	SUPERFAMILY	53822	Periplasmic binding protein-like I	coord: 164..618

Blast

[Close]

BLAST of TCONS_00049584-protein vs. Swiss-Prot (Human)
Match: GRM8 (Metabotropic glutamate receptor 8 OS=Homo sapiens GN=GRM8 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 1.410e-64
Identity = 193/747 (25.84%), Postives = 324/747 (43.37%), Query Frame = 0

Query:  208 GDPSLIRYGFKCRTSNVTAFYGPFYQDNYDVLAAMTHIYPITFMS-QSSSKENDDRLRYQFGKSKNQIHKYTLQTNPSTLFRNQVILDIILKFGWNFVAVFHSSFYIGESTSDVIFLLDK--SGICIP-STRLKGGIEGNTDENIKARIIELRENHPTLRVLLLLTDVADTRSVLKAIKELDLQNHFTLLFADRGVNDIEVVRGYEDIAVGAITIEPVNFHEKHLEQLADFEQWMLKANPTNTRNLYFHWYWEQTFECELNSHILDRMLTPDQRGTYQKKCTGDEQFQIGKGVYPDRNLFRGAMDTVEAIVFTLYRMELISTQSCEWVTSNKDLINIWSKDGCDKCPWNTTLCFNRFFEGVFPSINMLNYQRLLPDI---------GWSLKYNHPRDIPNASYEISNFIFTNGRYQSVPIGNWTIKVPAHETKVYFPTDVLKMNKPHMVIDTDRIFWRNGSAPEGKCALDCAPGYTRLYYLSKREVRK--CCWKCEKCDTHDIVV-ENKCHRCDRFQTPNIIKNVCEPLPIYHITLFSNSFATVLGIASMLGIIIVIAFGFILIYNNNKHVIKAAGRELSYCMLSGIFFLFISTILFLVYPSKSICIARFALPPMAQVVVYSSFLLKNIRLYRIFERYDRKVTQPYLISPKSQVIILLIIMSFQIGFAFIWTYDGLPDV------TRVLTSNEKQVMLMCTKTHKVRFVLNYFPAIFIIAACCIYCYKIRGLPKTYNETKFYIFTAF 932
            GDP +       +   ++   G        ++A +  ++ I  +S  S++ E  D  RY F            +  P   ++ Q ++DI+   GWN+V+   S    GES  +    + +   G+CI  S ++         E I  R++E     P  R +++  +  D R +L+A K+L+   HF  + +D   + I  V   E+IA GA+TI P       ++    + +    AN  N RN++F  +WE+ F C+L SH         +R ++ KKCTG E+       Y      +  +D V ++ + L+ M             +KDL           CP    LC         P ++ ++ + LL  I         G  + +N   D P   Y+I  +  TN   +   IG+WT                   N+ H+ ++  +   R  + P   C+L C PG        K+ V+   CCW CE+C+ ++  V E  C  C   Q PN+ +  C+ +PI  +   S  +A V    ++LGII         +  N+  +++A+GRELSY +L+GIF  +  T L +  P   IC  R     +     Y++ L K  R++RIFE+  + VT P  ISP SQ++I   ++S Q+   F+W     P +       R L   + + +L C     +  + +   +I ++  C +Y  K RG+P+T+NE K   FT +
Sbjct:  136 GDPPIFT-----KPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFS----------RVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLET----PNARAVIMFANEDDIRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILP---KRASIDGFDRYFRSRTLAN--NRRNVWFAEFWEENFGCKLGSH--------GKRNSHIKKCTGLERIARDSS-YEQEGKVQFVIDAVYSMAYALHNM-------------HKDL-----------CPGYIGLC---------PRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAP-GRYDIFQYQITNKSTEYKVIGHWT-------------------NQLHLKVEDMQWAHREHTHPASVCSLPCKPGE------RKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHS-PWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPDTIICSFRRVFLGLGMCFSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRTLDPEKARGVLKC-DISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMY 788

The following BLAST results are available for this feature:

BLAST of TCONS_00049584-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00049584-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRM8	1.410e-64	25.84	Metabotropic glutamate receptor 8 OS=Homo sapiens ...	[more]

You are here

TCONS_00049584-protein (polypeptide) - C. hemisphaerica