TCONS_00050427-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050427-protein
Unique NameTCONS_00050427-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050427-protein ID=TCONS_00050427-protein|Name=TCONS_00050427-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
FILHFCSSLMMFTGCLVYVILFFQPATYGRYSNATGNLLFCAIPARTAWF
LQEVPAFMVSVVLVFLVFLEWLPGGYTRTQLFVLSWFICHYFQRSFIYSL
SITGGKPTPFYAFFLAFVFCTGNGYMQARGALLLSNYPDDLLTKLRVTLG
LVLFCLGIYSNMKCDHMLRNLRKPGETGYKIPRGFLFDYVSCGNFFGEII
EWIGFAIASWSTVGAAFAFFTIANLVPRAVTHHRFYHQKFDDYPKSRKAV
IPFLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031932XLOC_031932Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050427TCONS_00050427Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0166363-oxo-5-alpha-steroid_4-DH
IPR0011043-oxo-5_a-steroid_4-DH_C
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:00038653-oxo-5-alpha-steroid 4-dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008202steroid metabolic process
GO:0006629lipid metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008202 steroid metabolic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0166363-oxo-5-alpha-steroid 4-dehydrogenasePIRSFPIRSF0155965_alpha-SR2coord: 2..255
e-value: 8.2E-79
score: 262.4
IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminalPFAMPF02544Steroid_dhcoord: 107..255
e-value: 6.3E-56
score: 188.4
IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminalPROSITEPS50244S5A_REDUCTASEcoord: 150..230
score: 34.118

Blast
[Close]
BLAST of TCONS_00050427-protein vs. Swiss-Prot (Human)
Match: S5A2 (3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sapiens GN=SRD5A2 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.627e-63
Identity = 111/254 (43.70%), Postives = 153/254 (60.24%), Query Frame = 0 
Query:    2 ILHFCSSLMMFTGCLVYVILFFQPATYGRYSNATGNLLFCAIPARTAWFLQEVPAFMVSVVLVFLVFLEWL-PGGYTRTQLFVLSWFICHYFQRSFIYSLSITGGKPTPFYAFFLAFVFCTGNGYMQARGALLLSNYPDDLLTKLRVTLGLVLFCLGIYSNMKCDHMLRNLRKPGETGYKIPRGFLFDYVSCGNFFGEIIEWIGFAIASWSTVGAAFAFFTIANLVPRAVTHHRFYHQKFDDYPKSRKAVIPFL 254
            +L   ++L+      +YV    +P+ YG+++ +        +PAR AWFLQE+P+F V   ++    L    P G       +L  F  HYF R+F+YSL +  G+P P         FCTGNG +Q    +  + YPD   T +R +LG+ LF LG+  N+  D++LR LRKPGE  Y+IP+G LF YVS  NF GEIIEWIG+A+A+WS    AFAFF++  L  RA  HHRFY + F+DYPKSRKA+IPF+
Sbjct:   10 VLAGSATLVALGALALYVA---KPSGYGKHTESLKPAA-TRLPARAAWFLQELPSFAVPAGILARQPLSLFGPPGTV-----LLGLFCVHYFHRTFVYSL-LNRGRPYPAILILRGTAFCTGNGVLQGYYLIYCAEYPDGWYTDIRFSLGVFLFILGMGINIHSDYILRQLRKPGEISYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCFLGLRAFHHHRFYLKMFEDYPKSRKALIPFI 253
The following BLAST results are available for this feature:
BLAST of TCONS_00050427-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S5A22.627e-6343.703-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sa... [more]
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