TCONS_00050566-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050566-protein
Unique NameTCONS_00050566-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050566-protein ID=TCONS_00050566-protein|Name=TCONS_00050566-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
MQYSNHVLQYDTARKIPKWVLEHMSKDDLKGHAERSQCNFKVDQSVPKQF
RSHNEDYLGSGFARGHMVPASDVKKSQESMQETFYLTNILPQDFDNNGGF
WYRMENYCRSLTNRFTDVYVISGPLFLSHFVQNKKMVTFQVIGDNNVAVP
SHLFKIILVENHGRPIAAGAFVVPNAPIADDKVLTDYQVSLSQIENMTGF
MFFPKIDMNNLPNLCSRDNCQLLTKNTADLNILMKNLKRVRSKEELDNLW
NQVLQKNVQLDQKFMQMYWEKRKTYEKDN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032020XLOC_032020Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050566TCONS_00050566Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001604DNA/RNA_non-sp_Endonuclease
IPR020821Extracellular_endonuc_su_A
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003676nucleic acid binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001604DNA/RNA non-specific endonucleaseSMARTSM00892Endonuclease_NS_2coord: 2..209
e-value: 3.4E-68
score: 242.6
IPR001604DNA/RNA non-specific endonucleasePFAMPF01223Endonuclease_NScoord: 3..206
e-value: 1.1E-54
score: 185.6
IPR020821Extracellular Endonuclease, subunit ASMARTSM00477endopluscoord: 3..209
e-value: 3.5E-74
score: 262.4
NoneNo IPR availableGENE3D3.40.570.10coord: 1..219
e-value: 1.2E-75
score: 253.5
NoneNo IPR availableCDDcd00091NUCcoord: 1..207
e-value: 4.94437E-65
score: 204.911
NoneNo IPR availableSUPERFAMILY54060His-Me finger endonucleasescoord: 3..224

Blast
[Close]
BLAST of TCONS_00050566-protein vs. Swiss-Prot (Human)
Match: EXOG (Nuclease EXOG, mitochondrial OS=Homo sapiens GN=EXOG PE=1 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.054e-90
Identity = 129/274 (47.08%), Postives = 183/274 (66.79%), Query Frame = 0 
Query:    3 YSNHVLQYDTARKIPKWVLEHMSKDDLKGHAERSQCNFKVDQSVPKQFRSHNEDYLGSGFARGHMVPASDVKKSQESMQETFYLTNILPQDFDNNGGFWYRMENYCRSLTNRFTDVYVISGPLFLSHFVQN-KKMVTFQVIGDNNVAVPSHLFKIILVENHG---RPIAAGAFVVPNAPIADDKVLTDYQVSLSQIENMTGFMFFPKID-MNNLPNLCSRDNCQLLTKNTADLNILMKNLKRVRSKEELDNLWNQVLQKNVQLDQKFMQMYWEK 271
            Y+NH L YD A+++P+WVLEH+SK  + G A+R  C FK D ++P  F + NEDY+GSG++RGHM PA + K S ++M ETFYL+NI+PQDFDNN G+W R+E YCR LT RF DV+V+SGPL L     + KK+V++QVIG++NVAVPSHL+K+IL         P+A GAFVVPN  I     LT++QVSL  +E ++G +FFP +D  +++ N+CS D C+LL      L +  + ++  RS   L+ +   +    ++ D  FM  Y +K
Sbjct:   77 YTNHALSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPHLDRTSDIRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKK 350
The following BLAST results are available for this feature:
BLAST of TCONS_00050566-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EXOG1.054e-9047.08Nuclease EXOG, mitochondrial OS=Homo sapiens GN=EX... [more]
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