TCONS_00050636-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050636-protein
Unique NameTCONS_00050636-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050636-protein ID=TCONS_00050636-protein|Name=TCONS_00050636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
QSTSCFFCGITGKKQDIVVHAKQCPARASVCSKCNKTGHYAKVCKIRPAR
KEMEINEVEESTSTDEESQVYNVNLFRINNSKNRTYTEDFRTNILINNHL
DTVLADTGAGISVCSMETAKKWNILDRMSKTNLRIKPYKSKPIPAIGVSR
CSVSFGDRTVPLQWYIIKEPCESILSGAMATQLNIVSFNNQPEVLTPVRM
IHLTDHLLKENLQDIITKRTPIFNGIGKLKNYLVKLPANPNIKAVAEPPR
RIPYHLKSRVEEVINEMKTQDVIEELPAGQQTPWISNVVIAPKDDGNIRI
TLDAKNLNKALLSSNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032077XLOC_032077Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050636TCONS_00050636Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom
IPR001878Znf_CCHC
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domainGENE3D2.40.70.10coord: 82..186
e-value: 7.8E-9
score: 35.3
IPR021109Aspartic peptidase domainSUPERFAMILY50630Acid proteasescoord: 89..171
NoneNo IPR availableGENE3D3.10.10.10coord: 233..316
e-value: 2.0E-13
score: 50.0
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 92..175
e-value: 9.8533E-9
score: 50.4128
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 233..312
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 1..49
e-value: 8.8E-6
score: 25.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 31..45
score: 8.664

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050636-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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