TCONS_00050676-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050676-protein
Unique NameTCONS_00050676-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length527

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050676-protein ID=TCONS_00050676-protein|Name=TCONS_00050676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=527bp
DLCGTIKCLFMNSESFIYGLPSNFHMGSPSMLMLPDGKGVDGTGLTFEIN
NPNAKLAPELETFKSLPWLQNTASIFCDLDIDHIEYFQTSCRQQCKKQLR
KMEALGYRFFSSFEYEFYLVDKDTLKPVYEESNWYSEEHIDRIRPFIQDV
MSYLQKTGIQVEAFTSEDGPAQQELTMKPTFGIQASDNAMLFKKAVKSSA
QKHHMKALFMTQPFEDHSHCSSHFNHSIWQLSKKENAFSQINKDDKLSDI
CKYWIAGLQHHSKALPALYWATNNCVEKCLAKDSQDSYFVPSNNTWGYDH
RGVRFRIKNYSPSCTYIEDRLPGAGCNPYLVTTGCLIAGMDGINRKLPLK
SEAFFGNILEAAGLPLGAEKVPESLEKAIEYLKEDXIKEKKIEFVQLEAI
DLCGTIKCLFMNSESFIYGLPSNFHMGSPSMLMLPDGKGVDGTGLTFEIN
NPNAKLAPELETFKSLPWLQNTASIFCDLDIDHIEYFQTSCRQQCKKQLR
KMEALGYRFFSSFEYEFYLVDKDTLKP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032105XLOC_032105Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050676TCONS_00050676Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008146Gln_synth_cat_dom
IPR014746Gln_synth/guanido_kin_cat_dom
IPR008147Gln_synt_b-grasp
Vocabulary: Molecular Function
TermDefinition
GO:0004356glutamate-ammonia ligase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
GO:0006542glutamine biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006542 glutamine biosynthetic process
biological_process GO:0006807 nitrogen compound metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004356 glutamate-ammonia ligase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008146Glutamine synthetase, catalytic domainSMARTSM01230Gln_synt_C_2coord: 88..339
e-value: 8.1E-57
score: 204.7
IPR008146Glutamine synthetase, catalytic domainPFAMPF00120Gln-synt_Ccoord: 90..388
e-value: 3.4E-66
score: 223.5
IPR014746Glutamine synthetase/guanido kinase, catalytic domainGENE3D3.30.590.10coord: 487..527
e-value: 1.5E-4
score: 20.4
IPR014746Glutamine synthetase/guanido kinase, catalytic domainGENE3D3.30.590.10coord: 86..390
e-value: 6.5E-65
score: 218.9
IPR008147Glutamine synthetase, beta-Grasp domainGENE3D3.10.20.70coord: 1..85
e-value: 7.2E-6
score: 25.6
coord: 391..486
e-value: 5.2E-12
score: 45.4
IPR008147Glutamine synthetase, beta-Grasp domainSUPERFAMILY54368Glutamine synthetase, N-terminal domaincoord: 385..479
IPR008147Glutamine synthetase, beta-Grasp domainSUPERFAMILY54368Glutamine synthetase, N-terminal domaincoord: 33..79
NoneNo IPR availableSUPERFAMILY55931Glutamine synthetase/guanido kinasecoord: 90..391

Blast
[Close]
BLAST of TCONS_00050676-protein vs. Swiss-Prot (Human)
Match: LGSN (Lengsin OS=Homo sapiens GN=LGSN PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.076e-45
Identity = 114/358 (31.84%), Postives = 178/358 (49.72%), Query Frame = 0 
Query:   33 MLPDGKGVDGTGLTFEINNPNAKLAPELETFKSLPWLQNTASIFCDLDIDHIEYFQTSCRQQCKKQLRKMEALGYRFFSSFEYEFYLVDKDTL---KPVYEESNWYSEEHIDRIRPFIQDVMSYLQKTGIQVEAFTSEDGPAQQELTMKPTFGIQASDNAMLFKKAVKSSAQKHHMKALFMTQPFEDHSHCSSH-FNHSIWQLSKKENAFSQINKDDKLSDICKYWIAGLQHHSKALPALYWATNNCVEKCLAKDSQD-SYFVPSNNTWGYDHRGVRFRIKNYSPSCTYIEDRLPGAGCNPYLVTTGCLIAGMDGINRKLPLKSEAFFGNILEAAGLPLGAEKVPESLEKAIEYLKED 385
            ++P+ K  +   +     N +  L PEL TF+ LPW   TA + CD      E   TS R   K+QL  ++A G+   S+F Y+F +     +   K +   +  +   H    +PF+Q+++  L  TG  VE+F+S   P Q E++  P FGI ++DNA   +  VK  A+K++  A F    F +   C S   +HS+W + +K+N F   +  ++L+   K W+AGL  HS AL  L   + +C  K  +KD +D    VP+  TWGY+     F IK +    T IE++L  A  NPYLV    + AG+DG++      +E   G         +   ++P  LE A+  L+ED
Sbjct:  126 VIPNPKDNEMNNIRATCFNSDIVLMPELSTFRVLPWADRTARVICDTFTVTGEPLLTSPRYIAKRQLSHLQASGFSLLSAFIYDFCIFGVPEILNSKIISFPALTFLNNHD---QPFMQELVDGLYHTGANVESFSSSTRPGQMEISFLPEFGISSADNAFTLRTGVKEVARKYNYIASF----FIETGFCDSGILSHSLWDVDRKKNMFCSTSGTEQLTITGKKWLAGLLKHSAALSCLMAPSVSC-RKRYSKDRKDLKKSVPT--TWGYNDNSCIFNIKCHGEKGTRIENKLGSATANPYLVLAATVAAGLDGLHS----SNEVLAGPDESTDFYQVEPSEIPLKLEDALVALEED 469
The following BLAST results are available for this feature:
BLAST of TCONS_00050676-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LGSN2.076e-4531.84Lengsin OS=Homo sapiens GN=LGSN PE=1 SV=1[more]
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