TCONS_00051311-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051311-protein
Unique NameTCONS_00051311-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length138

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051311-protein ID=TCONS_00051311-protein|Name=TCONS_00051311-protein|organism=Clytia hemisphaerica|type=polypeptide|length=138bp
MYGRSMGPTQVSVMSGQLSLQGLSRRSEQRVRLPSNVIGSLIGKGGCHIN
EIRQFSGATVQIEENKKDSRMSDVVIAGTPEAVSCATFLINARISAGRNA
IKNRRQGGQGGQGGANNGGGSGDERRGRRNDRNDYNRE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032517XLOC_032517Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051311TCONS_00051311Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 25..95
e-value: 2.3E-10
score: 50.4
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 29..91
e-value: 4.3E-15
score: 55.2
IPR004088K Homology domain, type 1GENE3D3.30.1370.10coord: 21..132
e-value: 8.9E-18
score: 63.4
IPR004088K Homology domain, type 1SUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 21..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..138
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 26..90
score: 16.101
NoneNo IPR availableCDDcd00105KH-Icoord: 28..90
e-value: 2.78883E-13
score: 59.8811

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051311-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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