TCONS_00052338-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052338-protein
Unique NameTCONS_00052338-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length828

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052338-protein ID=TCONS_00052338-protein|Name=TCONS_00052338-protein|organism=Clytia hemisphaerica|type=polypeptide|length=828bp
MVRIFIKGGVWSNTEDEILKAAVMKYGKNQWSRIASLLHKKSGKQCKARW
YEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPLVGRTATQCLERY
EYLLDQAQKKEGDGGSSEDPRKLRPGEIDPAPETKPARPDPIDMDEDEME
MLSEARARLANTQGKKAKRKAREKQLEEARRLASLQKRRELRAAGIQINR
YRKKKRGVDYNAEIPFERKPAQGFYDTSNEQVKALEPDYKKLRQEHMDDK
RRDIQEERDRRKDKDKQKKRKENDLPGAIASINKMMSQENTKKRSKLVLP
TPQVTDAELEEVVKLGIASEQAKEFVEGESESATKGLLSDYSVTPGTNLP
MRTPRTPAQQDNILQEAQNILNLQQVDTPLKGGLNTPMYESNFDGATPQR
QIQQTPNMMITTPYRTPGPEGQGFTPRGMTPKIGGTPGAGATPSVRDNLS
INREDAFYDDLSSAKQVQMENKNQLLAGLSSLPKPTNDFEIVVPEKFEID
MEEPTDPNFVEDMADVEARNYENLREKEAAEFRRRAQSVQRNMPRPSDVN
TSVLRPNHMKVDLNSLQMAEELIKEEMIKMLRNDIVSHPTETQMFALNQK
KTRAAAQTVMATNKRVLSEEPLEDVTDDEIKAARELLKEEIEVVKQGMNH
GDLTMEAYTKVWDECYGQLLFLPNQQRYTRSALASKKDRVESAEKRLEIY
RGQMTEDAKRAAKSEKKLKVLLGGYQSRAIALNKQISDLHDQLEQSRIQC
DTFDMLKKQEKHAVPRRLAALEEDVTRQTDREKALQHQFSDLLYERDRLK
QLKKRRDEADRTRRSDVEGRSPERRDQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033092XLOC_033092Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052338TCONS_00052338Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR021786Cdc5p/Cef1
IPR017930Myb_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 683..703
NoneNo IPR availableCOILSCoilCoilcoord: 247..274
NoneNo IPR availableCOILSCoilCoilcoord: 768..788
NoneNo IPR availableCOILSCoilCoilcoord: 168..188
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 11..71
e-value: 3.0E-14
score: 52.9
NoneNo IPR availableGENE3D1.10.10.60coord: 61..190
e-value: 1.3E-11
score: 44.2
NoneNo IPR availableGENE3D1.10.10.60coord: 4..60
e-value: 4.5E-16
score: 57.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 803..828
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 534..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..144
NoneNo IPR availableCDDcd11659SANT_CDC5_IIcoord: 56..108
e-value: 1.23709E-30
score: 114.329
NoneNo IPR availableCDDcd00167SANTcoord: 11..54
e-value: 7.61068E-13
score: 63.3634
IPR001005SANT/Myb domainSMARTSM00717santcoord: 59..106
e-value: 8.7E-12
score: 55.2
coord: 7..56
e-value: 3.2E-16
score: 69.9
IPR021786Pre-mRNA splicing factor component Cdc5p/Cef1PFAMPF11831Myb_Cefcoord: 405..656
e-value: 3.9E-68
score: 229.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 59..108
score: 15.016
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 3..58
score: 22.608
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 34..111

Blast
[Close]
BLAST of TCONS_00052338-protein vs. Swiss-Prot (Human)
Match: CDC5L (Cell division cycle 5-like protein OS=Homo sapiens GN=CDC5L PE=1 SV=2)

HSP 1 Score: 959.133 bits (2478), Expect = 0.000e+0
Identity = 500/809 (61.80%), Postives = 629/809 (77.75%), Query Frame = 0 
Query:    1 MVRIFIKGGVWSNTEDEILKAAVMKYGKNQWSRIASLLHKKSGKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPLVGRTATQCLERYEYLLDQAQKKEGDGGSSEDPRKLRPGEIDPAPETKPARPDPIDMDEDEMEMLSEARARLANTQGKKAKRKAREKQLEEARRLASLQKRRELRAAGIQINRYRKKKRGVDYNAEIPFERKPAQGFYDTSNEQVKALEPDYKKLRQEHMDDKRRDIQEERDRRKDKDKQKKRKENDLPGAIASINKMMSQENTKKRSKLVLPTPQVTDAELEEVVKLGIASEQAKEFVE--GESESATKGLLSDYSVTPGTNLPMRTPRTPAQQDNILQEAQNILNLQQVDTPLKGGLNTPMYESNFDGATPQRQIQQTPNMMITTPYRTPGPEGQGFTPR-GMTPK--IGGTPGAGATPSVRDNLSINREDAF--YDDLSSAKQVQMENKNQLLAGLSSLPKPTNDFEIVVPEKFEIDMEE-PTDPNFVEDMADVEARNYENLREKE-AAEFRRRAQSVQRNMPRPSDVNTSVLRPNHMKVDLNSLQMAEELIKEEMIKMLRNDIVSHPTETQMFALNQKKTRAAAQTVMATNKRVLSEEPLEDVTDDEIKAARELLKEEIEVVKQGMNHGDLTMEAYTKVWDECYGQLLFLPNQQRYTRSALASKKDRVESAEKRLEIYRGQMTEDAKRAAKSEKKLKVLLGGYQSRAIALNKQISDLHDQLEQSRIQCDTFDMLKKQEKHAVPRRLAALEEDVTRQTDREKALQHQFSDLLYERDRLK 800
            M RI IKGGVW NTEDEILKAAVMKYGKNQWSRIASLLH+KS KQCKARWYEWLDPSIKKTEWSREE+EKLLHLAKLMPTQWRTIAP++GRTA QCLE YE+LLD+A +++ +  +++DPRKL+PGEIDP PETKPARPDPIDMDEDE+EMLSEARARLANTQGKKAKRKAREKQLEEARRLA+LQKRRELRAAGI+I + RK+KRGVDYNAEIPFE+KPA GFYDTS E  +AL+ D++KLRQ+ +D + R  +E RDR+KDK   K++KE+DLP AI   + +   E TKKRSKLVLP PQ++DAEL+EVVK+G ASE A++  E  G + SA+  LLS+Y+VT   ++ +RTPRTPA QD ILQEAQN++ L  VDTPLKGGLNTP++ES+F G TPQRQ+ QTPN +++TP+RTP    +G TPR G TPK  I  TP  G TP +RD L+IN ED    Y D S  KQ++ E++  L  GL  LP P NDFEIV+PE  E ++EE   D  ++ED ADV+AR  + +R+ E   E +R  ++VQ+++PRPS+VN ++LRP +++  L  LQ +EELIK+EMI ML  D++ HP E    + N+K       T  + +   L   P E  + +E+K A+++L +E+EVVKQGM+HG+L+ EAY +VW+ECY Q+L+LP Q RYTR+ LASKKDR+ES EKRLEI RG MT +AKRAAK EKK+K+LLGGYQSRA+ L KQ++DL DQ+EQ+ ++  TF+ LKK E  A+PRRL  L+EDV RQ +REK LQH+++DLL E++ LK
Sbjct:    1 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGV--SEFTKKRSKLVLPAPQISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVT-NNSVALRTPRTPASQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVINSTP--GRTP-LRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARK-QAIRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEP---SGNKKGKTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYADLLLEKETLK 799
The following BLAST results are available for this feature:
BLAST of TCONS_00052338-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC5L0.000e+061.80Cell division cycle 5-like protein OS=Homo sapiens... [more]
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