Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00052733-protein ID=TCONS_00052733-protein|Name=TCONS_00052733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1402bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00052733-protein vs. Swiss-Prot (Human)
Match: CCD18 (Coiled-coil domain-containing protein 18 OS=Homo sapiens GN=CCDC18 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.607e-29 Identity = 332/1417 (23.43%), Postives = 648/1417 (45.73%), Query Frame = 0 Query: 22 EDDPLLRDCIGLRQRLLDTEKSLQNLTISTATPKISPNDSLRAARNETDKSILSDHAPILTLADLTPSGSVEDTLDTHPSHQSSKQAHNRPYSSLGEIDSGKAFQYEKDFNPITSLTQCRHHEDINTFRQKILVLREENSKMFLQNNKLMTELEKRTYKLQDCQSQLQEMNIAVKESKELKGCSVERMNE----LDSQLKRKTQVIRQME-------KIVGELRTHLNQQDTKE-----------------REEKERFDTELDSKE--KHIQELTSKIA----SIQKKDE-------------ERLKE---FHTKEVK-MKEELISVQQERNDFRLEADKMKQDNFKQQEQLTLIKSKTIELQN-------VAIELSATKSENTKLKTLIDKQQIQIKEYNTEIANYKNHVEKLEGMVQ----------------KVQEDTTTPRPDSGIGILSENHQDGNQSGTPRSIIADLKLKLAMKDTEMHKLKAIVANNSILQQKFKSDCDIENVNIKGLRSE--------LTSVVERSRKGDIKQMELEH--TITRLQEDISSKTRQL----VELNDRLNDKTHLVQSLEMKLDQKNGKLLEYQKELTNKDEHYEELEHQLQKSIKSLSDSMTKTKVSITEKDRQLSESKSLLETYSSQIKHLENALDVHNQETEATDALVHKIKNLHADHCHELENEISKWRQVSESKTQECIEMESLQHELLKEKVGLEESVKDLKDYVIKMEELDGEKKNMIKAYKDKIKSIQGKANEDSQSLQQLQTSLDHCKTQLQNALQEYDQSKQEHQKLIDNKTKSIDFLTDDLNIKTKHITEIEE-------SYKKALEMLEQSQKRIADLEDTSLRHVNDVAMEKQTNEELNQEIQ-------------------------LLHQKIDDLNG-------DIDLYQEQVETMNQALDEAKHKFKEVGVTLQNRDVKLMENSKQIQKLIN---EIEKL-NLTKTELTNQLNGYKTNTLNLEKTIQIQKEKYKACSEKCQGLENRVSNAHDKLRGYEASLQNIESTKIKTNEKLE--YTQ-RLLTTSQGESNMKIKELNQCRLQIHEMENAISESEWKVKQKSALYTQLEMSCKQERSELEKQISTLTFEVDELKGMLQEKENKIKDQSSNYEELRIDYDERNLLCEDLRNQLRMQEEANIHASSEVKILKGELNQL------IEKVHQQSE------------FENEANIVKEQYHHLNTKVQNLQNQLMTSQQTIINLTNELEESHSMMSQKESDCTRLARELGASQVREAQEKSRLNQELRETIQNHDFKFSQKLEEMDSLREKNDDLVTTQQQDILKLRLALQRSEDETRLAKNDLERRKERVGELETSVRELTFELQEQQQRCKELDEMLVIREAETARHSARASGLER 1286 E++ LL + LR L TE SLQ+L ++ +SP+++ SD+AP PS S + LD PSH + PY ++ +I SG + ++K + ++I + R+K+ LR++N+ + QN+ LMT+ E ++L +++ +++ ES + + SV + E L++++ + +V+R+ E K+V E L Q++KE R E++R + +++E K Q+ K+A +Q ++E +RL+E + E++ +KE+L +++E N+ + + M N + QLT + ++L++ + + + +EN +LK + Q ++ EI + + + LE ++ K Q + + + D IG N + +I++L++KLA+K+ E+ KL A + N + Q + E+ + L +E + SV ++++ KQ E E +T + E++ +K Q+ +L + +T Q ++ +L +K + + E+T K LE QL++ I + S SI K+ +L + L+E + +I+ LE + N E E K K +H + E+E +I + E K Q+ E E L ++ + + ++ L D ++ + + +K+NM K + +K++Q + +E++ ++QL ++L+ CK +L L + + +K++ +K + K++ + L +L IK + E E + ++ +ML+Q R +LEDT + +EKQ ++ L QE+Q L QK+ +L G ++D Y+E++ M + + K + + L D+ L + +++K N E+EKL + T+TELT L +K + LE + NAH +L+ LQ + K LE YT + LT E M+I++ Q ++ EM+ A+ E W++KQ++A T L+M+ ++ R E+E++I +L+G L++ E ++K+ + E L N ++ + QLR +E + E+ LK E+ + +E V ++ E E + +EQ + +T++ ++Q + +Q+ I L++ELE+ + +K++ LA ELGAS+VREA ++R+ E++ K S E++SL+E + + Q++ K +++ + + LE+ K + E + +V L ++Q++ + + +E L+ +E+E R A+ SG E+ Sbjct: 14 EEESLLANVASLRHELKITEWSLQSLGEELSS--VSPSEN-------------SDYAP-------NPSRSEKLILDVQPSHPGL--LNYSPYENVCKI-SGSSTDFQKKPRDKMFSSSAPVDQEIKSLREKLNKLRQQNACLVTQNHSLMTKFESIHFELTQSRAK-----VSMLESAQQQAASVPILEEQIINLEAEVSAQDKVLREAENKLEQSQKMVIEKEQSL--QESKEECIKLKVDLLEQTKQGKRAERQRNEALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNCEKENKRLQERCGLYKSELEILKEKLRQLKEENNNGKEKLRIMAVKNSEVMAQLTESRQSILKLESELENKDEILRDKFSLMNENRELKVRVAAQNERLDLCQQEIESSRVELRSLEKIISQLPLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEAN----------KLVISELRIKLAIKEAEIQKLHANLTANQLSQSLITCNDSQESSKLSSLETEPVKLGGHQVESVKDQNQHTMNKQYEKERQRLVTGI-EELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYS--------SIAAKNAELEQE--LMEK-NEKIRSLETNI---NTEHEKICLAFEKAKKIHLEQHKEMEKQIERLEAQLEKKDQQFKEQEKTMSMLQQDIICKQHHLESL-DRLLTESKGEMKKENMKK--DEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTK------LEKQVSK-LEQELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTNAVKELEKLQHSTETELTEAL-------------------------QKREVLETELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQ---ELLEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQKII-------KLEGTLEKSELELKECNKQIESL-------NDKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQEQYIATQYKEAIDLGQELRLTREQVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLAEELGASKVREAHLEARMQAEIK--------KLSA---EVESLKEAYHMEMISHQENHAKWKISADSQKSSVQQLNEQLEKAKLELEEAQDTVSNLHQQVQDRNEVIEAANEALLTKESELTRLQAKISGHEK 1310 The following BLAST results are available for this feature:
BLAST of TCONS_00052733-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|