TCONS_00052733-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052733-protein
Unique NameTCONS_00052733-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1402

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052733-protein ID=TCONS_00052733-protein|Name=TCONS_00052733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1402bp
MAFSRSQDQRRQSNTSSLSALEDDPLLRDCIGLRQRLLDTEKSLQNLTIS
TATPKISPNDSLRAARNETDKSILSDHAPILTLADLTPSGSVEDTLDTHP
SHQSSKQAHNRPYSSLGEIDSGKAFQYEKDFNPITSLTQCRHHEDINTFR
QKILVLREENSKMFLQNNKLMTELEKRTYKLQDCQSQLQEMNIAVKESKE
LKGCSVERMNELDSQLKRKTQVIRQMEKIVGELRTHLNQQDTKEREEKER
FDTELDSKEKHIQELTSKIASIQKKDEERLKEFHTKEVKMKEELISVQQE
RNDFRLEADKMKQDNFKQQEQLTLIKSKTIELQNVAIELSATKSENTKLK
TLIDKQQIQIKEYNTEIANYKNHVEKLEGMVQKVQEDTTTPRPDSGIGIL
SENHQDGNQSGTPRSIIADLKLKLAMKDTEMHKLKAIVANNSILQQKFKS
DCDIENVNIKGLRSELTSVVERSRKGDIKQMELEHTITRLQEDISSKTRQ
LVELNDRLNDKTHLVQSLEMKLDQKNGKLLEYQKELTNKDEHYEELEHQL
QKSIKSLSDSMTKTKVSITEKDRQLSESKSLLETYSSQIKHLENALDVHN
QETEATDALVHKIKNLHADHCHELENEISKWRQVSESKTQECIEMESLQH
ELLKEKVGLEESVKDLKDYVIKMEELDGEKKNMIKAYKDKIKSIQGKANE
DSQSLQQLQTSLDHCKTQLQNALQEYDQSKQEHQKLIDNKTKSIDFLTDD
LNIKTKHITEIEESYKKALEMLEQSQKRIADLEDTSLRHVNDVAMEKQTN
EELNQEIQLLHQKIDDLNGDIDLYQEQVETMNQALDEAKHKFKEVGVTLQ
NRDVKLMENSKQIQKLINEIEKLNLTKTELTNQLNGYKTNTLNLEKTIQI
QKEKYKACSEKCQGLENRVSNAHDKLRGYEASLQNIESTKIKTNEKLEYT
QRLLTTSQGESNMKIKELNQCRLQIHEMENAISESEWKVKQKSALYTQLE
MSCKQERSELEKQISTLTFEVDELKGMLQEKENKIKDQSSNYEELRIDYD
ERNLLCEDLRNQLRMQEEANIHASSEVKILKGELNQLIEKVHQQSEFENE
ANIVKEQYHHLNTKVQNLQNQLMTSQQTIINLTNELEESHSMMSQKESDC
TRLARELGASQVREAQEKSRLNQELRETIQNHDFKFSQKLEEMDSLREKN
DDLVTTQQQDILKLRLALQRSEDETRLAKNDLERRKERVGELETSVRELT
FELQEQQQRCKELDEMLVIREAETARHSARASGLEREIFTNRSAIKSYNH
KPTNQSNVSFHQNPTNHTQDIHETSNTLIQTLKKQTELDKLRSQASDRRN
SLEDLLKRTEAELKDLDMTGFSNSLDTTQQTENGADNESLISGVSSFTTP
FS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033336XLOC_033336Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052733TCONS_00052733Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 856..890
NoneNo IPR availableCOILSCoilCoilcoord: 575..602
NoneNo IPR availableCOILSCoilCoilcoord: 487..549
NoneNo IPR availableCOILSCoilCoilcoord: 294..314
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availableCOILSCoilCoilcoord: 248..275
NoneNo IPR availableCOILSCoilCoilcoord: 659..679
NoneNo IPR availableCOILSCoilCoilcoord: 793..841
NoneNo IPR availableCOILSCoilCoilcoord: 621..641
NoneNo IPR availableCOILSCoilCoilcoord: 1338..1369
NoneNo IPR availableCOILSCoilCoilcoord: 181..201
NoneNo IPR availableCOILSCoilCoilcoord: 1218..1273
NoneNo IPR availableCOILSCoilCoilcoord: 758..785
NoneNo IPR availableCOILSCoilCoilcoord: 898..932
NoneNo IPR availableCOILSCoilCoilcoord: 705..739
NoneNo IPR availableCOILSCoilCoilcoord: 346..387
NoneNo IPR availableCOILSCoilCoilcoord: 1007..1076
NoneNo IPR availableCOILSCoilCoilcoord: 1101..1135
NoneNo IPR availableGENE3D1.20.5.170coord: 1001..1092
e-value: 0.011
score: 15.3
NoneNo IPR availableGENE3D1.20.120.330coord: 605..754
e-value: 0.0018
score: 17.4
coord: 133..278
e-value: 0.0031
score: 16.6
NoneNo IPR availableGENE3D1.10.287.620coord: 847..995
e-value: 6.4E-4
score: 18.7
NoneNo IPR availableGENE3D1.20.5.340coord: 1093..1196
e-value: 0.29
score: 10.4
NoneNo IPR availableGENE3D1.20.5.50coord: 524..604
e-value: 0.015
score: 14.5
NoneNo IPR availableGENE3D1.20.5.340coord: 755..844
e-value: 3.5E-6
score: 26.5
NoneNo IPR availableGENE3D1.20.5.730coord: 413..523
e-value: 0.012
score: 15.1
coord: 319..390
e-value: 0.12
score: 11.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1370..1402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..119
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 738..991

Blast
BLAST of TCONS_00052733-protein vs. Swiss-Prot (Human)
Match: CCD18 (Coiled-coil domain-containing protein 18 OS=Homo sapiens GN=CCDC18 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.607e-29
Identity = 332/1417 (23.43%), Postives = 648/1417 (45.73%), Query Frame = 0
Query:   22 EDDPLLRDCIGLRQRLLDTEKSLQNLTISTATPKISPNDSLRAARNETDKSILSDHAPILTLADLTPSGSVEDTLDTHPSHQSSKQAHNRPYSSLGEIDSGKAFQYEKDFNPITSLTQCRHHEDINTFRQKILVLREENSKMFLQNNKLMTELEKRTYKLQDCQSQLQEMNIAVKESKELKGCSVERMNE----LDSQLKRKTQVIRQME-------KIVGELRTHLNQQDTKE-----------------REEKERFDTELDSKE--KHIQELTSKIA----SIQKKDE-------------ERLKE---FHTKEVK-MKEELISVQQERNDFRLEADKMKQDNFKQQEQLTLIKSKTIELQN-------VAIELSATKSENTKLKTLIDKQQIQIKEYNTEIANYKNHVEKLEGMVQ----------------KVQEDTTTPRPDSGIGILSENHQDGNQSGTPRSIIADLKLKLAMKDTEMHKLKAIVANNSILQQKFKSDCDIENVNIKGLRSE--------LTSVVERSRKGDIKQMELEH--TITRLQEDISSKTRQL----VELNDRLNDKTHLVQSLEMKLDQKNGKLLEYQKELTNKDEHYEELEHQLQKSIKSLSDSMTKTKVSITEKDRQLSESKSLLETYSSQIKHLENALDVHNQETEATDALVHKIKNLHADHCHELENEISKWRQVSESKTQECIEMESLQHELLKEKVGLEESVKDLKDYVIKMEELDGEKKNMIKAYKDKIKSIQGKANEDSQSLQQLQTSLDHCKTQLQNALQEYDQSKQEHQKLIDNKTKSIDFLTDDLNIKTKHITEIEE-------SYKKALEMLEQSQKRIADLEDTSLRHVNDVAMEKQTNEELNQEIQ-------------------------LLHQKIDDLNG-------DIDLYQEQVETMNQALDEAKHKFKEVGVTLQNRDVKLMENSKQIQKLIN---EIEKL-NLTKTELTNQLNGYKTNTLNLEKTIQIQKEKYKACSEKCQGLENRVSNAHDKLRGYEASLQNIESTKIKTNEKLE--YTQ-RLLTTSQGESNMKIKELNQCRLQIHEMENAISESEWKVKQKSALYTQLEMSCKQERSELEKQISTLTFEVDELKGMLQEKENKIKDQSSNYEELRIDYDERNLLCEDLRNQLRMQEEANIHASSEVKILKGELNQL------IEKVHQQSE------------FENEANIVKEQYHHLNTKVQNLQNQLMTSQQTIINLTNELEESHSMMSQKESDCTRLARELGASQVREAQEKSRLNQELRETIQNHDFKFSQKLEEMDSLREKNDDLVTTQQQDILKLRLALQRSEDETRLAKNDLERRKERVGELETSVRELTFELQEQQQRCKELDEMLVIREAETARHSARASGLER 1286
            E++ LL +   LR  L  TE SLQ+L    ++  +SP+++             SD+AP        PS S +  LD  PSH      +  PY ++ +I SG +  ++K        +     ++I + R+K+  LR++N+ +  QN+ LMT+ E   ++L   +++     +++ ES + +  SV  + E    L++++  + +V+R+ E       K+V E    L  Q++KE                 R E++R +   +++E  K  Q+   K+A     +Q ++E             +RL+E    +  E++ +KE+L  +++E N+ + +   M   N +   QLT  +   ++L++       +  +  +  +EN +LK  +  Q  ++     EI + +  +  LE ++                 K Q  + + + D  IG    N          + +I++L++KLA+K+ E+ KL A +  N + Q     +   E+  +  L +E        + SV ++++    KQ E E    +T + E++ +K  Q+     +L   +  +T   Q ++ +L +K     + + E+T K      LE QL++ I + S        SI  K+ +L +   L+E  + +I+ LE  +   N E E       K K +H +   E+E +I +     E K Q+  E E     L ++ +  +  ++ L D ++   + + +K+NM K   + +K++Q + +E++  ++QL ++L+ CK +L   L + + +K++ +K +  K++ +  L  +L IK   + E  E       + ++  +ML+Q   R  +LEDT  +      +EKQ ++ L QE+Q                         L  QK+ +L G       ++D Y+E++  M + +   K   +   + L   D+ L +   +++K  N   E+EKL + T+TELT  L                         +K + LE  + NAH +L+     LQ +     K    LE  YT  + LT    E  M+I++  Q   ++ EM+ A+ E  W++KQ++A  T L+M+ ++ R E+E++I        +L+G L++ E ++K+ +   E L       N   ++ + QLR +E   +    E+  LK E+ +       +E V ++ E               E  + +EQ  + +T++   ++Q + +Q+ I  L++ELE+   +  +K++    LA ELGAS+VREA  ++R+  E++        K S    E++SL+E     + + Q++  K +++    +   +     LE+ K  + E + +V  L  ++Q++ +  +  +E L+ +E+E  R  A+ SG E+
Sbjct:   14 EEESLLANVASLRHELKITEWSLQSLGEELSS--VSPSEN-------------SDYAP-------NPSRSEKLILDVQPSHPGL--LNYSPYENVCKI-SGSSTDFQKKPRDKMFSSSAPVDQEIKSLREKLNKLRQQNACLVTQNHSLMTKFESIHFELTQSRAK-----VSMLESAQQQAASVPILEEQIINLEAEVSAQDKVLREAENKLEQSQKMVIEKEQSL--QESKEECIKLKVDLLEQTKQGKRAERQRNEALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNCEKENKRLQERCGLYKSELEILKEKLRQLKEENNNGKEKLRIMAVKNSEVMAQLTESRQSILKLESELENKDEILRDKFSLMNENRELKVRVAAQNERLDLCQQEIESSRVELRSLEKIISQLPLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEAN----------KLVISELRIKLAIKEAEIQKLHANLTANQLSQSLITCNDSQESSKLSSLETEPVKLGGHQVESVKDQNQHTMNKQYEKERQRLVTGI-EELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYS--------SIAAKNAELEQE--LMEK-NEKIRSLETNI---NTEHEKICLAFEKAKKIHLEQHKEMEKQIERLEAQLEKKDQQFKEQEKTMSMLQQDIICKQHHLESL-DRLLTESKGEMKKENMKK--DEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTK------LEKQVSK-LEQELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTNAVKELEKLQHSTETELTEAL-------------------------QKREVLETELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQ---ELLEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQKII-------KLEGTLEKSELELKECNKQIESL-------NDKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQEQYIATQYKEAIDLGQELRLTREQVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLAEELGASKVREAHLEARMQAEIK--------KLSA---EVESLKEAYHMEMISHQENHAKWKISADSQKSSVQQLNEQLEKAKLELEEAQDTVSNLHQQVQDRNEVIEAANEALLTKESELTRLQAKISGHEK 1310          
The following BLAST results are available for this feature:
BLAST of TCONS_00052733-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD181.607e-2923.43Coiled-coil domain-containing protein 18 OS=Homo s... [more]
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