TCONS_00053023-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053023-protein
Unique NameTCONS_00053023-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053023-protein ID=TCONS_00053023-protein|Name=TCONS_00053023-protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp
MKSLLISFLFAAVFAANPNEEQCRTYAGGNVYPDERKHGVEHALHWSKAQ
ISKPAPFWEGKAVVNGEFKDMKLTDFKGKYLVFFFYPLDFTFVCPTEIIA
FSDRVEEFRKINTEVVAVSVDSVFTHLAWINTPRNQGGLGKMKIPLLADL
TKQISKDYGVLLEDLGHTLRGLFIIDDKGVLRQITMNDLPVGRSVDETLR
LVQAFQYTDQHGEVCPAGWKPGADTIVPDPKAKLNYFNKVNEKSEM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033489XLOC_033489Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053023TCONS_00053023Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019479Peroxiredoxin_C
IPR000866AhpC/TSA
IPR024706Peroxiredoxin_AhpC-typ
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0051920peroxiredoxin activity
GO:0016209antioxidant activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016209 antioxidant activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051920 peroxiredoxin activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019479Peroxiredoxin, C-terminalPFAMPF104171-cysPrx_Ccoord: 204..231
e-value: 4.6E-13
score: 48.7
NoneNo IPR availableGENE3D3.40.30.10coord: 35..204
e-value: 1.6E-33
score: 115.0
NoneNo IPR availableGENE3D3.30.1020.10coord: 205..246
e-value: 2.8E-22
score: 78.3
NoneNo IPR availableSFLDSFLDS00024Peroxiredoxincoord: 63..210
e-value: 3.0E-36
score: 119.4
NoneNo IPR availableCDDcd03015PRX_Typ2cyscoord: 51..222
e-value: 3.32741E-112
score: 321.376
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 52..183
e-value: 3.7E-34
score: 117.2
IPR024706Peroxiredoxin, AhpC-typePIRSFPIRSF000239AHPCcoord: 47..245
e-value: 1.2E-59
score: 198.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 49..207
score: 15.785
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 50..242

Blast
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BLAST of TCONS_00053023-protein vs. Swiss-Prot (Human)
Match: PRDX4 (Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 2.231e-133
Identity = 175/221 (79.19%), Postives = 197/221 (89.14%), Query Frame = 0 
Query:   23 CRTYAGGNVYPDE--RKHGVEHALHWSKAQISKPAPFWEGKAVVNGEFKDMKLTDFKGKYLVFFFYPLDFTFVCPTEIIAFSDRVEEFRKINTEVVAVSVDSVFTHLAWINTPRNQGGLGKMKIPLLADLTKQISKDYGVLLEDLGHTLRGLFIIDDKGVLRQITMNDLPVGRSVDETLRLVQAFQYTDQHGEVCPAGWKPGADTIVPDPKAKLNYFNKVN 241
            C  YAGG VYP E  R    +H+LH SKA+ISKPAP+WEG AV++GEFK++KLTD++GKYLVFFFYPLDFTFVCPTEIIAF DR+EEFR INTEVVA SVDS FTHLAWINTPR QGGLG ++IPLL+DLT QISKDYGV LED GHTLRGLFIIDDKG+LRQIT+NDLPVGRSVDETLRLVQAFQYTD+HGEVCPAGWKPG++TI+PDP  KL YF+K+N
Sbjct:   51 CHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 271
The following BLAST results are available for this feature:
BLAST of TCONS_00053023-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRDX42.231e-13379.19Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1[more]
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