TCONS_00053610-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053610-protein
Unique NameTCONS_00053610-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053610-protein ID=TCONS_00053610-protein|Name=TCONS_00053610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MEGSSCCNKYFWFEVLILFVSLYFLINYIVDHWISTKVKQNVLVTGCDSG
FGLQTALVLSESNCKVFAGCLTQDGVKQLENDARFQGMAFIMDVTKDEDV
QNTKKIIEENGGIDGLVNNAGILIHGLIEWQSIELMKKTFEVNYWGLVRV
TKVILPLLKKSRGRIVNLTSIGGRLTPPYTAPYYCSKYAAEAFSDSLRLE
VKPWGISVHIIEPSYYKTAITNEETVRRNWQKLWNEQPDEIQNEIDEKTF
HEFVTAFYKQISIGSENIIEVALVIKHALLAKFPRRRYITGVNCGLAAFA
THLPTVLGDFFMALSVPLLRPIKTPKKTN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033826XLOC_033826Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053610TCONS_00053610Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 111..122
score: 62.65
coord: 41..58
score: 37.34
coord: 183..202
score: 26.68
coord: 157..173
score: 35.29
coord: 204..221
score: 26.76
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 163..171
score: 50.65
coord: 111..122
score: 60.97
coord: 183..202
score: 31.71
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 41..224
e-value: 2.1E-39
score: 134.9
NoneNo IPR availableGENE3D3.40.50.720coord: 38..309
e-value: 3.1E-48
score: 164.2
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 40..293

Blast
[Close]
BLAST of TCONS_00053610-protein vs. Swiss-Prot (Human)
Match: H17B6 (17-beta-hydroxysteroid dehydrogenase type 6 OS=Homo sapiens GN=HSD17B6 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 4.203e-53
Identity = 106/308 (34.42%), Postives = 166/308 (53.90%), Query Frame = 0 
Query:   16 LILFVSLYFLINYIVDHWISTKVKQN-VLVTGCDSGFGLQTALVLSESNCKVFAGCLTQDGVKQLENDARFQGMAFIMDVTKDEDVQNTKKIIEE---NGGIDGLVNNAGILIH-GLIEWQSIELMKKTFEVNYWGLVRVTKVILPLLKKSRGRIVNLTSIGGRLTPPYTAPYYCSKYAAEAFSDSLRLEVKPWGISVHIIEPSYYKTAITNEETVRRNWQKLWNEQPDEIQNEIDEKTFHEFVTAFYKQISIGSENIIEVALVIKHALLAKFPRRRYITGVNCGLAAFA-THLPTVLGDFFMALSVP 317
            L  FV LY+L+++  +  + + ++   V +TGCDSGFG   A  L     +V A CLT+ G +QL      +     +DVTK E +    + ++E   + G+ GLVNNAGIL    L EW + E      +VN  G+++VT  +LPL++++RGRIVN++SI GR+   +   Y  SKY  EAFSD LR E++ +G+ + I+EP Y++T +TN        ++ W E P  I+    ++ F        + +   S N+  V   ++HAL +  PR RY  G +        ++LPT L D+ +  S P
Sbjct:    5 LAAFVGLYYLLHWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDARGLRVLAACLTEKGAEQLRGQTSDRLETVTLDVTKMESIAAATQWVKEHVGDRGLWGLVNNAGILTPITLCEWLNTEDSMNMLKVNLIGVIQVTLSMLPLVRRARGRIVNVSSILGRVAF-FVGGYCVSKYGVEAFSDILRREIQHFGVKISIVEPGYFRTGMTNMTQSLERMKQSWKEAPKHIKETYGQQYFDALYNIMKEGLLNCSTNLNLVTDCMEHALTSVHPRTRYSAGWDAKFFFIPLSYLPTSLADYILTRSWP 311
The following BLAST results are available for this feature:
BLAST of TCONS_00053610-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
H17B64.203e-5334.4217-beta-hydroxysteroid dehydrogenase type 6 OS=Hom... [more]
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