TCONS_00054509-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00054509-protein
Unique Name	TCONS_00054509-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	794

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00054509-protein ID=TCONS_00054509-protein|Name=TCONS_00054509-protein|organism=Clytia hemisphaerica|type=polypeptide|length=794bp
MAATKTKFGVVKTILLITILIVIVQIITVSFITSQDNFEERARRDHTKIH
ETDFIYDETYLPNALTKENIDNNYSNKNDHINLMTMTTEPVRCDVKHKDA
KSALSRVKSEQCKNELYQTICAAQEKTLFWKNITRMCQVPAGKRPAHSIQ
SKMGYGPPIRILYAMVVHGRAFRQVKRLFKALYHKNHYFYIHVDSRSDYL
YEELKTFVKRFDNVAVAPWRMATIWGGASLLQMLLRMMADVLRMADWKWD
FFLNISAADYPVQHNEKLSAFLRSHRDENFLKPHGGKTERFVKKQGLSRI
FYECDEHMWRLGDRDLPSNIDFDGGSDWICLNRKFVDYLVHSDDTLVNGM
KHMYRYALLPAESFFHVVLRNSRYCTSFAKGNMRLANWKRKLGCRCQYKH
IVDWCGCSPNDFKPEDLVRLQSQTINHFARKFEPIVNQEIINLLDEWLFG
KPETPLIARNVYWENVYHSRHDNGSKFDMILTALQSFSRIASKEQTVNDC
EFFPIWRPEQATLYMSNDTFHGVLSQQEYKVIAGRTLRETISVETFFQPI
RFLEMRNRNMSEPANRLQSLAVGTSWDQKERIFRNIAGIIGPRDEPVLVH
RWVHGPEFHVRIVWQDPLNVIAGMYQMKVDKTWVISFHKPKFNKPLRPGT
WTVKIVFNDDITLGLTKFLVIPQNYYDGKEGVLNDVIATNNGPPAGLYAS
DYVVEFDRAANDTSERVVEFAKNSKSIGSSLEGWIDSIMQQHWKFVGICV
SSERTGVKNKCIAQLPSCSDTDWSSKSPDPKSEVKRIEPNGYLS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034372	XLOC_034372	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00054509	TCONS_00054509	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024448	XylT
IPR003406	Glyco_trans_14

Vocabulary: **Molecular Function**
Term	Definition
GO:0030158	protein xylosyltransferase activity
GO:0008375	acetylglucosaminyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006024	glycosaminoglycan biosynthetic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006024	glycosaminoglycan biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0008375	acetylglucosaminyltransferase activity
molecular_function	GO:0030158	protein xylosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024448	Xylosyltransferase	PFAM	PF12529	Xylo_C	coord: 445..622 e-value: 2.4E-42 score: 144.5
IPR003406	Glycosyl transferase, family 14	PFAM	PF02485	Branch	coord: 163..413 e-value: 1.6E-39 score: 135.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 768..794

Blast

[Close]

BLAST of TCONS_00054509-protein vs. Swiss-Prot (Human)
Match: XYLT2 (Xylosyltransferase 2 OS=Homo sapiens GN=XYLT2 PE=1 SV=2)

HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0
Identity = 324/720 (45.00%), Postives = 427/720 (59.31%), Query Frame = 0

Query:   92 RCDVKHKDAKSALSRVKSEQCKNELYQTICAAQEKTLFWKNITRMCQVPAGKRPA-----HSIQSKMGYGPPIRILYAMVVHGRAFRQVKRLFKALYHKNHYFYIHVDSRSDYLYEELKTFVKRFDNVAVAPWRMATIWGGASLLQMLLRMMADVLRMADWKWDFFLNISAADYPVQHNEKLSAFLRSHRDENFLKPHGGKTERFVKKQGLSRIFYECDEHMWRLGDRDLPSNIDFDGGSDWICLNRKFVDYLVHSDDTLVNGMKHMYRYALLPAESFFHVVLRNSRYCTSFAKGNMRLANWKRKLGCRCQYKHIVDWCGCSPNDFKPEDLVRLQSQT-INHFARKFEPIVNQEIINLLDEWLFGK--PETPLIARNVYWENVYHSRHDNGSKFDMILTALQSFSRI-------ASKEQTVNDCEFFPIWRPEQATLYMSNDTFHGVLSQQEYKVIAGRTLRETISVETFFQPIRFLEMRNRNMSEPANRLQSLAVGTSWDQKERIFRNIAGIIGPRDEPVLVHRWVHGPEFHVRIVWQDPLNVIAGMYQMKVDKTWVISFHKPKFNKPLRPGTWTVKIV-FNDDITLGLTKFLVIPQNYYDGKEGVLNDVIATNNGPPAGLYASDYVVEFDRAANDTSERVVEFA--KNSKSIGSSLEGWIDSIMQQHWKFVGICVSSERTGVKNKCIAQLPSCSDTDWSSKSPDPKSEVKRIEPNGYL 793
            +C++  KDA SAL+R  ++QC+ E+   +C  Q  +L  K + R CQ+     P         Q  M  GPP+RI Y +VVHGRA RQ+KRL KA+YH+ H+FYIHVD RSDYL+ E+    + +DNV V PWRM TIWGGASLL+M LR M D+L +  W WDFF+N+SA DYP + NE+L AFL  +RD+NFLK HG    RF+KKQGL R+F+ECD HMWRLG+R +P+ I  DGGSDW  L R FV+Y+V++DD LV  ++  Y Y LLPAESFFH VL NS  C +    N+R+ NW RKLGC+CQYKHIVDWCGCSPNDFKP+D +RLQ  +    FARKFE  VNQE++ +LD  L+G   P TP  A   YWEN Y +        D++LTA  +F+R+       A+       C F P   P    LY  +D F G L  Q  +  A +   ET+  E +  P   L++  R  S+ A+RLQSL VGT WD KER+FRN  G++GP DEPV V RW  GP     +VW DP  V+A  Y + VD    ++ +KP  ++PLRPG WTV+++ F +   LG T+FLV+P  +        +D    + GPP   Y            N     + E A  ++++  G +LE W D  +   W   G+C       +       L  C  T WSS SPDPKSE+  ++ +G L
Sbjct:  161 KCEIVGKDALSALARASTKQCQQEIANVVCLHQAGSLMPKAVPRHCQLTGKMSPGIQWDESQAQQPMD-GPPVRIAYMLVVHGRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREVVELAQGYDNVRVTPWRMVTIWGGASLLRMYLRSMRDLLEVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRDKNFLKSHGRDNSRFIKKQGLDRLFHECDSHMWRLGERQIPAGIVVDGGSDWFVLTRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSLACETLVDNNLRVTNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFLRLQQVSRPTFFARKFESTVNQEVLEILDFHLYGSYPPGTP--ALKAYWENTYDAADGPSGLSDVMLTAYTAFARLSLHHAATAAPPMGTPLCRFEPRGLPSSVHLYFYDDHFQGYLVTQAVQPSA-QGPAETL--EMWLMPQGSLKLLGR--SDQASRLQSLEVGTDWDPKERLFRNFGGLLGPLDEPVAVQRWARGPNLTATVVWIDPTYVVATSYDITVDTETEVTQYKPPLSRPLRPGPWTVRLLQFWE--PLGETRFLVLPLTFNRKLPLRKDDASWLHAGPPHNEYMEQSFQGLSSILNLPQPELAEEAAQRHTQLTGPALEAWTDRELSSFWSVAGLCA------IGPSPCPSLEPCRLTSWSSLSPDPKSELGPVKADGRL 864

The following BLAST results are available for this feature:

BLAST of TCONS_00054509-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00054509-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
XYLT2	0.000e+0	45.00	Xylosyltransferase 2 OS=Homo sapiens GN=XYLT2 PE=1...	[more]

You are here

TCONS_00054509-protein (polypeptide) - C. hemisphaerica