TCONS_00054985-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00054985-protein
Unique Name	TCONS_00054985-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	495

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00054985-protein ID=TCONS_00054985-protein|Name=TCONS_00054985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=495bp
MKDLQPETEESEVLENFELAVQLVKSLPQKGSFQPSYAEAARIYSYFKQA
KFGPCNIPKPGFWDYINRAKWDAWSGLGDLPREKAMQNYVDEIKVLFVRV
KELEEFQEREHEFAKFLIPFCKANHIPMSRKLMDMVKKEDKMNDHVEMPS
IVSSQANISVSNGATKTGNDILTDDESELETNGHEHSILLEKTHESKNVK
FELNEESIPEGPLGVSSNESIEIVELDKSKDETSSDEKEDEDEEEEIFCD
PLDPSEMPMEKESVTESSLTTTDSGVTFNETVITNKPVVRKRSKVIESSS
DSHDPVSRELKQPYHKPRRGQYKRTGFSNGGISRSYHVRRHKRLDENNGR
DNGHRNNGNHHHQHQRSHPPAGTHSVSHPSHSSNHPSQQSQGNNPPSDHS
DSTDSYVSSGSYSNDTIGLKIVNSLERMEDNMQSIIERLDSIEETVKVVT
KPKVPWWQQYMPSKTMMIWTFWPIIVNILFFLYWKRFRRQKIKKC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034645	XLOC_034645	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00054985	TCONS_00054985	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000582	Acyl-CoA-binding_protein
IPR014352	FERM/acyl-CoA-bd_prot_3-hlx

Vocabulary: **Molecular Function**
Term	Definition
GO:0000062	fatty-acyl-CoA binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0000062	fatty-acyl-CoA binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 425..445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..411
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 79..96 score: 29.63 coord: 14..29 score: 34.23 coord: 58..73 score: 48.51 coord: 35..53 score: 40.6
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 15..95 e-value: 1.5E-21 score: 76.3
IPR000582	Acyl-CoA-binding protein, ACBP	PROSITE	PS51228	ACB_2	coord: 13..102 score: 36.324
IPR000582	Acyl-CoA-binding protein, ACBP	SUPERFAMILY	47027	Acyl-CoA binding protein	coord: 15..96
IPR014352	FERM/acyl-CoA-binding protein, 3-helical bundle	GENE3D	1.20.80.10		coord: 6..116 e-value: 6.4E-29 score: 99.6

Blast

[Close]

BLAST of TCONS_00054985-protein vs. Swiss-Prot (Human)
Match: ACBD5 (Acyl-CoA-binding domain-containing protein 5 OS=Homo sapiens GN=ACBD5 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.168e-32
Identity = 125/526 (23.76%), Postives = 226/526 (42.97%), Query Frame = 0

Query:   17 FELAVQLVKSLPQKGSFQPSYAEAARIYSYFKQAKFGPCNIPKPGFWDYINRAKWDAWSGLGDLPREKAMQNYVDEIKVLFVRVKELEEFQEREHEFAKFLIPFCKANHIPMSRKLMDMVK-KEDKMNDHVE-MPSIVSSQANISVSN----------------------GATKTGND----ILTDDESELE---TNGHEHSILLEKTHESKNVKFELNEESIPEGP-----LGVSSNESIEIVE--LDKSKDETSSDEKEDEDEEEEIFCDPLDPSEMPMEKESVTESSLTTTDSGVTFNETVITNKPVVRKRSKVIESSSDSHDPVSRELKQPYHKPRRGQYKRTGFSNGGISRSYHVRRHKRLDENNGRDNGHRNNGNHHHQHQRSHPPAGTHSVSHPSHSSNHPSQQSQGNNPPSDHSDSTDSYVSSGSYSNDTIGLKIVNSLERMEDNMQSIIERLDSIE-----------ETVKVVTKP---KVPWWQQYMPSKTMMIWTFWPIIVNILFFLYWKRFRRQ 490
            FE AV++++SLP+ GSFQP+     + YS++KQA  GPC + +PGFWD I R KWDAWS LGD+ +E+AM  YV+E+K    ++ E     E+  E  + + PF +      S +  D+   + +K++  +E + ++++S  N    N                      GA ++ ND      + D   LE   TNG++    ++      +    LN  S  E       LG +   ++ I +   D   ++ +  +    D + E++CD +   E   ++ES+   S T+ +    +     +++P        +E+S    D     ++ P               NG I     V    + +  +G ++G  N+G  H + +       ++      H   H S+ ++G       S        S   S  ++  +I   L R++++MQ++++RL  +E            T++   +P   +  WW   M    +     WP I   L +LY++R RR+
Sbjct:   45 FEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMK----KIIETMPMTEKVEELLRVIGPFYEIVEDKKSGRSSDITSVRLEKISKCLEDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQEEVKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDKDGFVQDIQNDIHASSSLNGRSTEEVKPIDENLGQTGKSAVCIHQDINDDHVEDVTGIQHLTSDSDSEVYCDSM---EQFGQEESL--DSFTSNNGPFQYYLGGHSSQP--------MENSGFRED-----IQVPP-------------GNGNIGNMQVVAVEGKGEVKHGGEDGRNNSGAPHREKRGGETDEFSNVRRGRGHRMQHLSEGTKGRQV---GSGGDGERWGSDRGSRGSLNEQIALVLMRLQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSWWPFEMSPGVLTFAIIWPFIAQWLVYLYYQRRRRK 532

The following BLAST results are available for this feature:

BLAST of TCONS_00054985-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00054985-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ACBD5	6.168e-32	23.76	Acyl-CoA-binding domain-containing protein 5 OS=Ho...	[more]

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TCONS_00054985-protein (polypeptide) - C. hemisphaerica