TCONS_00055085-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055085-protein
Unique NameTCONS_00055085-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055085-protein ID=TCONS_00055085-protein|Name=TCONS_00055085-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MNCTLCKNWKISAQVLRSYTTQMKSLQINKYAPSVDLLNYQLSSPSITNH
FLKPDEALVKVHAASINPFDIEMSRGYGRKAINLVRSYANSKEFPLILGR
DFSGVVVKSGRLFKRFKRGDPVYGVRWVTGQGTHAEYVIVNKSEISPKPV
NLTHIEAASLPYVACTTWSALMDSGAVSIMGSRKLNIFIPGGTGGIGSFA
VQLCKAYGHNVTTACAPNGVSILNNIDIYNVLDYTSNTYENDLQNNGPYD
VILDTQNERYVNLYKKVLKESSKSKYVSLRPTLLPDTDSKGMTLGLIDAG
GKYAKSSIEQLSSGKGQYQWGFFKPNGMVLDHIKPLIENGNIKTLVDKVF
PLDDIVNAYKYVEKGHARGKTVIGMVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034705XLOC_034705Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055085TCONS_00055085Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013154ADH_N
IPR016040NAD(P)-bd_dom
IPR011032GroES-like
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020843Polyketide synthase, enoylreductase domainSMARTSM00829PKS_ER_names_modcoord: 35..373
e-value: 2.0E-9
score: -29.5
NoneNo IPR availablePFAMPF13602ADH_zinc_N_2coord: 230..373
e-value: 5.7E-17
score: 62.9
NoneNo IPR availableGENE3D3.40.50.720coord: 196..302
e-value: 9.7E-5
score: 22.0
NoneNo IPR availableGENE3D3.90.180.10coord: 303..377
e-value: 1.0E-5
score: 24.8
NoneNo IPR availableGENE3D3.90.180.10coord: 16..195
e-value: 1.6E-38
score: 131.6
NoneNo IPR availableCDDcd08248RTN4I1coord: 23..373
e-value: 8.52428E-138
score: 398.905
IPR013154Alcohol dehydrogenase, N-terminalPFAMPF08240ADH_Ncoord: 54..125
e-value: 2.8E-7
score: 30.3
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 333..372
coord: 152..289
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 50..176

Blast
[Close]
BLAST of TCONS_00055085-protein vs. Swiss-Prot (Human)
Match: RT4I1 (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 1.268e-76
Identity = 138/371 (37.20%), Postives = 210/371 (56.60%), Query Frame = 0 
Query:   10 KISAQVLRSYTTQMKSLQINKYAPSVDLLNYQLSSPSITNHFLKPDEALVKVHAASINPFDIEMSRGYGRKAINLVRSYANSK----EFPLILGRDFSGVVVKSGRLFKRFKRGDPVYGVRWVTGQGTHAEYVIVNKSEISPKPVNLTHIEAASLPYVACTTWSALMDSGAVSIMGSRKLNIFIPGGTGGIGSFAVQLCKAYGHNVTTACAPNGVSILNNIDIYNVLDYTSNTYENDLQNNGPYDVILDTQNERYVNLYKKVLKESSKSKYVSLRPTLLPDTDSKGMTLGLIDAGGKYAKSSIEQLSSGKGQYQWGFFKPNGMVLDHIKPLIENGNIKTLVDKVFPLDDIVNAYKYVEKGHARGKTVIGMV 376
            +IS    RS  T M +  I+KY  + ++L +  +      H+  P+E +VKVHAAS+NP D+ M  GYG  A+N+ R   + K    EFPL LGRD SGVV++ G   K FK GD V+       QGT +E+V+V+ +E+S KP +LTH +AASLPYVA T WSA+   G ++        + I G +GG+G+FA+Q+ KA+  +VT  C+ +   ++  +   +V+DY S + E  L++  P+D ILD             LK+ S + YV+L    L + D  G+  G++  G      +++    G   Y+W FF  +G  LD I  L++ G I+ ++++ FP   +  A+  VE+GHARGKTVI +V
Sbjct:   32 RISTTSPRS--TVMPAWVIDKYGKN-EVLRFTQNMMMPIIHY--PNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGV-HYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINVV 396
The following BLAST results are available for this feature:
BLAST of TCONS_00055085-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RT4I11.268e-7637.20Reticulon-4-interacting protein 1, mitochondrial O... [more]
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