TCONS_00055258-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055258-protein
Unique NameTCONS_00055258-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length337

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055258-protein ID=TCONS_00055258-protein|Name=TCONS_00055258-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
DLLTRLPDLDDIENRKPLDYFTHPPWLSNPNIEIFSSLPGIENKHANQNQ
ILEATLTQLRSLNPTYTIYTDGSAMAGTTDGGAGLVVTTDDPAEIAPVTI
IKTKGAKFTSSYEEEVRAMERAAEWIAVNTEDDDSIVIATDSQSLCQALQ
HNNREIDAIIQRLSQTKAKITIQWLPGHSNIPGNEAADKAAKEATKLEGV
HQTTSMKCARTIIKSNIKDGDPERPWLKEVYSKYSMSKEKAVKTRHDQVD
LARIRCGKHLAFAAYDHQLHEEVDPKCPHCDHQQHDLQHWFLDCPDTREA
RFEIFGEEVDDGLSLLTKRPEQSIALARRTLLGARIN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034801XLOC_034801Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055258TCONS_00055258Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002156RNaseH_domain
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004523RNA-DNA hybrid ribonuclease activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF00075RNase_Hcoord: 66..195
e-value: 4.1E-14
score: 52.9
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 62..196
score: 18.583
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 43..206
e-value: 2.5E-24
score: 85.1
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 65..197
NoneNo IPR availableCDDcd09276Rnase_HI_RT_non_LTRcoord: 67..184
e-value: 7.87148E-19
score: 79.5692

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055258-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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