TCONS_00055617-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055617-protein
Unique NameTCONS_00055617-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length902

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055617-protein ID=TCONS_00055617-protein|Name=TCONS_00055617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=902bp
MEALEWSECSETLDDLLKNPRVQLPQLLKLSSSFKDINSNESLQKDQIIV
IHSKETIETIHGVDADGKTIIIPIDCPFKTRRKVSPGKEKVFDSVTELAQ
SDPLPRFVEVKESHDVQNLSNGDRLKVVIVEKAAGAPSVLHCRSSSGKHV
KISVNENISFQSSVSDGSDQSIAKLSEKSREFPFCVEFLKQKETPDIHTK
LGIFTIQECKSETVVIASATVNSKEIAIVFPLHSEFSFQVTSKLKMAKDE
GYRELCNNSSSIDPEKIVEFINHKSPKDTQMQYVLPLKKLQKILNFDYSP
DTDQSSPKEKQKSNEKPKSARKEKKESPKIEKENKSRKYKPTKQLPSLTQ
NDSAVELEESENEIEEEPLPPNTLVADAEQKEILKREIKERERQIKLEKE
QMKAEKKREKKLKKEREKEEKKKKKLSTSSLSSTTSAPGSPVDIAVESED
IYIVPQDEVDAASPESPRTEEEQQSQFAMYLMGKVKKVRDRTTSMGFRPK
NKKRGKLRKEDIEYISGEHLGPIIPQDESYYSGLGNDEAFSDSLYEALPG
EMAYESLDLVAQAQRSLTLPVQTENSGDSGFDEIDQARIKAWRDSMAPPP
LPGNHPLQNHSAQEEENLYETAVDCKKAVQQGQSMAAWQNFYDSVHQSTN
EIATWDMEDVASCLSDLLLTNYIEVFSDSQVDGQLLLDLDESVLKDLGLS
PFEARKLRKFVFGWRPDTIRPPTYPQRLGFDSKDPTQWNEGDVVKHLQTI
DLNDFANFCQSNQVNGELLKDLCVDDVLMGTIITTKDKKLKAVKIKNYVI
DQWRPKKKGEGNYMSSQSILPPEKRSLSTANINKVGNSSPKVTIASQVSA
STTSINKVSSGASPKARNSPPSKKITTGGDAPLIARMKQQLEDNKNNWKE
KK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034989XLOC_034989Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055617TCONS_00055617Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
100200300400500600700800900Score = Score = SequenceCoilG3DSA:1.10.150.50G3DSA:1.10.150.50mobidb-litemobidb-litemobidb-litecd09487SM00454PF00536PS50105SSF47769SSF47769
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 374..429
NoneNo IPR availableGENE3D1.10.150.50coord: 729..815
e-value: 1.1E-5
score: 25.2
NoneNo IPR availableGENE3D1.10.150.50coord: 646..716
e-value: 9.2E-11
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 848..880
NoneNo IPR availableCDDcd09487SAM_superfamilycoord: 659..706
e-value: 5.49587E-7
score: 46.8489
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 652..717
e-value: 0.0026
score: 27.0
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 654..703
e-value: 3.3E-6
score: 27.3
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 655..706
score: 10.209
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 650..707
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 733..778

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055617-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
100200300400500600700800900Sequence
Match NameE-valueIdentityDescription
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