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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00055617-protein ID=TCONS_00055617-protein|Name=TCONS_00055617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=902bp
MEALEWSECSETLDDLLKNPRVQLPQLLKLSSSFKDINSNESLQKDQIIV
IHSKETIETIHGVDADGKTIIIPIDCPFKTRRKVSPGKEKVFDSVTELAQ
SDPLPRFVEVKESHDVQNLSNGDRLKVVIVEKAAGAPSVLHCRSSSGKHV
KISVNENISFQSSVSDGSDQSIAKLSEKSREFPFCVEFLKQKETPDIHTK
LGIFTIQECKSETVVIASATVNSKEIAIVFPLHSEFSFQVTSKLKMAKDE
GYRELCNNSSSIDPEKIVEFINHKSPKDTQMQYVLPLKKLQKILNFDYSP
DTDQSSPKEKQKSNEKPKSARKEKKESPKIEKENKSRKYKPTKQLPSLTQ
NDSAVELEESENEIEEEPLPPNTLVADAEQKEILKREIKERERQIKLEKE
QMKAEKKREKKLKKEREKEEKKKKKLSTSSLSSTTSAPGSPVDIAVESED
IYIVPQDEVDAASPESPRTEEEQQSQFAMYLMGKVKKVRDRTTSMGFRPK
NKKRGKLRKEDIEYISGEHLGPIIPQDESYYSGLGNDEAFSDSLYEALPG
EMAYESLDLVAQAQRSLTLPVQTENSGDSGFDEIDQARIKAWRDSMAPPP
LPGNHPLQNHSAQEEENLYETAVDCKKAVQQGQSMAAWQNFYDSVHQSTN
EIATWDMEDVASCLSDLLLTNYIEVFSDSQVDGQLLLDLDESVLKDLGLS
PFEARKLRKFVFGWRPDTIRPPTYPQRLGFDSKDPTQWNEGDVVKHLQTI
DLNDFANFCQSNQVNGELLKDLCVDDVLMGTIITTKDKKLKAVKIKNYVI
DQWRPKKKGEGNYMSSQSILPPEKRSLSTANINKVGNSSPKVTIASQVSA
STTSINKVSSGASPKARNSPPSKKITTGGDAPLIARMKQQLEDNKNNWKE
KK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 374..429 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 729..815
e-value: 1.1E-5
score: 25.2 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 646..716
e-value: 9.2E-11
score: 41.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 298..380 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 393..475 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 848..880 |
| None | No IPR available | CDD | cd09487 | SAM_superfamily | coord: 659..706
e-value: 5.49587E-7
score: 46.8489 |
| IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM_4 | coord: 652..717
e-value: 0.0026
score: 27.0 |
| IPR001660 | Sterile alpha motif domain | PFAM | PF00536 | SAM_1 | coord: 654..703
e-value: 3.3E-6
score: 27.3 |
| IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 655..706
score: 10.209 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 650..707 |
| IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 733..778 |
Blast
The following BLAST results are available for this feature:
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