TCONS_00055684-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055684-protein
Unique NameTCONS_00055684-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length299

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055684-protein ID=TCONS_00055684-protein|Name=TCONS_00055684-protein|organism=Clytia hemisphaerica|type=polypeptide|length=299bp
FHENIESICFKFEEEIENVNNIENRNIAGNELDTVKVKIEEKDYDFVSID
GNATTASLQIDSSIDIKIEFDEISTFAAEESSNTDYLTKIASSIVESEKE
RIKEGDNSNNYFECNDCGACYTSKEFLDQHFVQKHRLINNLNCAVCGKHF
TQKYNLNVHLRTHTGERPFQCEECGKSFTYKSGLNIHLRSHTGKGQECGK
QFTGSRAANVMSRTNDSPSKYFKCNKCGVCYTTKEFLEKHFLQKHSNATK
FQCEKCGRSFTQKYNLASHLKLTSEKRFLYCSERFATKSQKVHKRIKPC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035039XLOC_035039Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055684TCONS_00055684Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 169..191
e-value: 1.1E-4
score: 31.5
coord: 112..135
e-value: 0.43
score: 19.6
coord: 251..271
e-value: 5.9
score: 15.3
coord: 141..163
e-value: 0.0043
score: 26.3
coord: 222..245
e-value: 0.24
score: 20.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 171..191
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 143..163
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 169..196
score: 15.126
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 251..278
score: 11.676
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 222..250
score: 9.577
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 141..168
score: 16.041
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 112..135
score: 8.787
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 220..271
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 142..191
NoneNo IPR availableGENE3D2.20.28.10coord: 196..234
e-value: 0.0013
score: 18.5
NoneNo IPR availableGENE3D3.30.160.60coord: 175..195
e-value: 1.4E-12
score: 47.0
NoneNo IPR availableGENE3D3.30.160.60coord: 262..299
e-value: 1.0E-6
score: 28.0
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 142..163
e-value: 6.6E-6
score: 26.2
coord: 169..191
e-value: 1.7E-6
score: 28.1
coord: 251..271
e-value: 6.0E-6
score: 26.3
NoneNo IPR availableGENE3D2.20.25.10coord: 163..174
e-value: 5.2E-7
score: 29.1
NoneNo IPR availableGENE3D3.30.160.60coord: 149..162
e-value: 9.6E-12
score: 44.3
NoneNo IPR availableGENE3D3.30.160.60coord: 34..122
e-value: 0.015
score: 14.9
NoneNo IPR availableGENE3D2.20.28.10coord: 123..148
e-value: 1.5E-4
score: 20.9
NoneNo IPR availableGENE3D3.30.160.60coord: 235..261
e-value: 1.4E-9
score: 37.7

Blast
BLAST of TCONS_00055684-protein vs. Swiss-Prot (Human)
Match: ZN569 (Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.227e-31
Identity = 76/205 (37.07%), Postives = 121/205 (59.02%), Query Frame = 0
Query:  100 ERIKEGDNSNNYFECNDCGACYTSKEFLDQHFVQKHRLINNLNCAVCGKHFTQKYNLNVHLRTHTGERPFQCEECGKSFTYKSGLNIHLRSHTGKGQ----ECGKQFTGSRAANVMSRTNDSPSKYFKCNKCGVCYTTKEFLEKHFLQKHSNATKFQCEKCGRSFTQKYNLASHL-KLTSEKRF--LYCSERFATKSQKV-HKRI 296
            E+I  G+     +ECN+CG  ++ K+    H  + H      +C  CGK F+Q  +L +HLR+HTGE+P++C++CGK+F+  S LN+H+RSHTG+      ECGK F+  R + ++     +  K ++CNKCG  ++    L  H ++ H+    F C KCG++F+Q  +L  H+ K T EK +  + C + F+ KS  V H+RI
Sbjct:  485 EKIHSGEKP---YECNECGKAFSQKQNFITH-QKVHTGEKPYDCNECGKAFSQIASLTLHLRSHTGEKPYECDKCGKAFSQCSLLNLHMRSHTGEKPYVCNECGKAFS-QRTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLTIH-IRGHTGEKPFDCSKCGKAFSQISSLTLHMRKHTGEKPYHCIECGKAFSQKSHLVRHQRI 683          

HSP 2 Score: 106.686 bits (265), Expect = 1.115e-25
Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 0
Query:  112 FECNDCGACYTSKEFLDQHFVQKHRLINNLNCAVCGKHFTQKYNLNVHLRTHTGERPFQCEECGKSFTYKSGLNIHLRSHTGKG----QECGKQFTGSRAANVMSRTNDSPSKYFKCNKCGVCYTTKEFLEKHFLQKHSNATKFQCEKCGRSFTQKYNLASHLKLTSEKRFLYCSE---RFATKS-----QKVHKRIKP 298
            + CN+CG  +     L  H ++ H       C  CGK F+Q   L +H+R HTGE+P++C ECGK+F+  S L +H+RSHTG+     +EC K F+  +   +  +   +  K ++CN+CG  +     L +H  + H+    + C++CG++F+QK NL +H K+ S ++   C+E    F+ K      QKVH   KP
Sbjct:  326 YACNECGKAFPRIASLALH-MRSHTGEKPYKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECGKAFSQSSALTVHMRSHTGEKPYECKECRKAFSHKKNF-ITHQKIHTREKPYECNECGKAFIQMSNLVRH-QRIHTGEKPYICKECGKAFSQKSNLIAHEKIHSGEKPYECNECGKAFSQKQNFITHQKVHTGEKP 521          

HSP 3 Score: 97.4413 bits (241), Expect = 1.194e-22
Identity = 61/203 (30.05%), Postives = 102/203 (50.25%), Query Frame = 0
Query:  112 FECNDCGACYTSKEFLDQH------------------FVQKHRLINN---------LNCAVCGKHFTQKYNLNVHLRTHTGERPFQCEECGKSFTYKSGLNIHLRSHTG----KGQECGKQFTGSRAANVMSRTNDSPSKYFKCNKCGVCYTTKEFLEKHFLQKHSNATKFQCEKCGRSFTQKYNLASHLKLTSEKRFLYCSE 283
            ++CN+CG  +     L +H                  F QK  LI++           C  CGK F+QK +L  H + HTGE+P+ C ECGK+F   + L +H+RSHTG    K  +CGK F+      +  R +    K ++CN+CG  ++    L  H ++ H+    ++C++C ++F+ K N  +H K+ + ++   C+E
Sbjct:  242 YKCNECGKAFIKMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDHEKIHTGEKPYECNECGKAFSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAFSQFSMLIIHVRIHTG-EKPYECNECGKAFSQSSALTVH-MRSHTGEKPYECKECRKAFSHKKNFITHQKIHTREKPYECNE 442          

HSP 4 Score: 97.0561 bits (240), Expect = 1.841e-22
Identity = 63/189 (33.33%), Postives = 104/189 (55.03%), Query Frame = 0
Query:  101 RIKEGDNSNNYFECNDCGACYTSKEFLDQHFVQKHRLINNLNCAVCGKHFTQKYNLNVHLRTHTGERPFQCEECGKSFTYKSGLNIHLRSHTGKGQ----ECGKQFTGSRA--ANVMSRTNDSPSKYFKCNKCGVCYTTKEFLEKHFLQKHSNATKFQCEKCGRSFTQKYNLASHLKLTSEKRFLYCSE 283
            RI  G+     +EC++C   ++ KE L +H+ + H    +  C  CGK F +  NL  H R HTGE+P+ C+EC KSF+ KS L  H + HTG+      ECGK F+  ++  A+    T + P   + CN+CG  +     L  H ++ H+    ++C+KCG++F+Q   L  H+++ + ++   C+E
Sbjct:  206 RIHTGEKP---YECSNCRKAFSHKEKLIKHY-KIHSREQSYKCNECGKAFIKMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDHEKIHTGEKPYECNECGKAFSQKQSLIAHQKVHTGEKP---YACNECGKAFPRIASLALH-MRSHTGEKPYKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNE 386          

HSP 5 Score: 82.8037 bits (203), Expect = 1.125e-17
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 0
Query:  135 HRLINNLNCAVCGKHFTQKYNLNVHLRTHTGERPFQCEECGKSFTYKSGL----NIHLRSHTGKGQECGKQFTGSRAANVMSRTN-DSPSKYFKCNKCGVCYTTKEFLEKHFLQKHSNATKFQCEKCGRSFTQKYNLASHLKLTSEKRFLYCSE 283
            H +I    C  CGK F Q  +L  HLR HTGE+P++C  C K+F++K  L     IH R  + K  ECGK F   + +N++      +  K + C +C   ++ K  L  H  + H+    ++C +CG++F+QK +L +H K+ + ++   C+E
Sbjct:  180 HFVITPFKCNHCGKGFNQTLDLIRHLRIHTGEKPYECSNCRKAFSHKEKLIKHYKIHSREQSYKCNECGKAFI--KMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDH-EKIHTGEKPYECNECGKAFSQKQSLIAHQKVHTGEKPYACNE 330          
The following BLAST results are available for this feature:
BLAST of TCONS_00055684-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5691.227e-3137.07Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 ... [more]
back to top