TCONS_00055685-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055685-protein
Unique NameTCONS_00055685-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length234

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055685-protein ID=TCONS_00055685-protein|Name=TCONS_00055685-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
LNKTFTKRFSLKRHLVLHTGEKPFKCDECGKCFPFQHELTQHSIKHSGIK
PFKCEECDESFQSYYFLKNHLIKVHNGGQPFNCKECGKSFPCQSALTRHL
MVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRS
KLTRHLNVHSEIKPYKCQECGKCFAEQRSLTRHTEALCGVMPLKCEECGR
RFKYVESLTKHQKTHEAKPCQREKVXSLFVELCH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035040XLOC_035040Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055685TCONS_00055685Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 165..185
e-value: 16.0
score: 11.5
coord: 52..75
e-value: 0.0056
score: 25.9
coord: 81..103
e-value: 7.6E-4
score: 28.8
coord: 109..131
e-value: 0.0022
score: 27.2
coord: 24..46
e-value: 0.11
score: 21.6
coord: 193..215
e-value: 0.0012
score: 28.1
coord: 137..159
e-value: 8.8E-5
score: 31.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 26..46
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 83..103
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 195..215
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 109..131
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 54..75
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 139..159
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 165..192
score: 11.863
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 137..164
score: 16.061
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 81..108
score: 14.669
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 24..51
score: 13.983
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1..23
score: 9.972
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 193..220
score: 12.196
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 52..80
score: 12.528
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 109..136
score: 16.768
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 4..61
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 118..174
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 163..215
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 75..127
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 52..75
e-value: 5.0E-4
score: 20.6
NoneNo IPR availableGENE3D2.20.28.30coord: 175..202
e-value: 5.8E-16
score: 58.1
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 110..131
e-value: 6.5E-5
score: 23.1
coord: 137..159
e-value: 8.1E-7
score: 29.1
coord: 194..215
e-value: 5.4E-5
score: 23.3
coord: 81..103
e-value: 1.5E-4
score: 21.9
coord: 24..46
e-value: 8.6E-4
score: 19.5
NoneNo IPR availableGENE3D3.30.160.60coord: 99..122
e-value: 3.7E-20
score: 71.2
NoneNo IPR availableGENE3D2.20.28.30coord: 123..148
e-value: 2.1E-21
score: 75.4
NoneNo IPR availableGENE3D2.20.25.10coord: 15..28
e-value: 6.2E-6
score: 25.6
NoneNo IPR availableGENE3D3.30.160.60coord: 2..14
e-value: 0.081
score: 12.7
NoneNo IPR availableGENE3D3.30.160.60coord: 149..174
e-value: 1.1E-18
score: 66.8
coord: 203..229
e-value: 1.9E-5
score: 24.4
NoneNo IPR availableGENE3D3.30.160.60coord: 88..98
e-value: 1.7E-8
score: 33.9
NoneNo IPR availablePFAMPF16622zf-C2H2_11coord: 165..183
e-value: 2.4E-5
score: 23.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 51..87
e-value: 1.2E-17
score: 63.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 29..50
e-value: 1.2E-15
score: 56.7

Blast
BLAST of TCONS_00055685-protein vs. Swiss-Prot (Human)
Match: ZN708 (Zinc finger protein 708 OS=Homo sapiens GN=ZNF708 PE=1 SV=5)

HSP 1 Score: 214.927 bits (546), Expect = 2.996e-67
Identity = 116/233 (49.79%), Postives = 145/233 (62.23%), Query Frame = 0
Query:    3 KTFTKRFSLKRHLVLHTGEKPFKCDECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTRHTEALCGVMPLKCEECGRRFKYVESLTKHQKTH-EAKPCQREKVXSLFVELCH 234
            K F K  + KRH + HTG+ PFKC ECGK F    +LTQH I H+G KP+KCEEC ++F+    L NH I +H G +P+ C+ECGK+F   S LTRH ++H+  +  KCEECGK F    NL  H  +HTGEKP+KCEECGK+F+Q S LT H  +H+  KPYKC ECGK F     LT H     G  P KCEECG+ F    +LTKH+  H E KP + E+    F    H
Sbjct:   83 KVFHKYSNAKRHKIRHTGKNPFKCKECGKSFCMLSQLTQHEIIHTGEKPYKCEECGKAFKKSSNLTNHKI-IHTGEKPYKCEECGKAFNQSSTLTRHKIIHTGEKLYKCEECGKAFNRSSNLTKHKIVHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHKRIHTGEKPYKCEECGKAFSVFSTLTKHKIIHTEEKPYKCEECGKAFNRSSH 314          

HSP 2 Score: 207.608 bits (527), Expect = 2.028e-64
Identity = 103/214 (48.13%), Postives = 140/214 (65.42%), Query Frame = 0
Query:    2 NKTFTKRFSLKRHLVLHTGEKPFKCDECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTRHTEALCGVMPLKCEECGRRFKYVESLTKHQKTH 215
             K F+   +L +H ++HT EKP+KC+ECGK F     LT H + H+G KP+KCEEC ++F     L  H + +H G +P+ C+ECGK+F   S LT+H ++H++ +P KCEECGK F    N  +H +IHTGEKP+KCEECGKSF   S LT H  +H+  KPYKC+ECGK F +  +L +H     G  P KCEECG+ F    +LTKH++ H
Sbjct:  278 GKAFSVFSTLTKHKIIHTEEKPYKCEECGKAFNRSSHLTNHKVIHTGEKPYKCEECGKAFTKSSTLTYHKV-IHTGKKPYKCEECGKAFSIFSILTKHKVIHTEDKPYKCEECGKTFNYSSNFTNHKKIHTGEKPYKCEECGKSFILSSHLTTHKIIHTGEKPYKCKECGKAFNQSSTLMKHKIIHTGEKPYKCEECGKAFNQSPNLTKHKRIH 490          

HSP 3 Score: 204.912 bits (520), Expect = 2.614e-63
Identity = 107/234 (45.73%), Postives = 146/234 (62.39%), Query Frame = 0
Query:    2 NKTFTKRFSLKRHLVLHTGEKPFKCDECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTRHTEALCGVMPLKCEECGRRFKYVESLTKHQKTHEA-KPCQREKVXSLFVELCH 234
             K F +  +L +H ++HTGEKP+KC+ECGK F     LT H   H+G KP+KC EC ++F     L  H  ++H G +P+ C+ECGK+F   S LT+H ++H++ +P KCEECGK F    +L +H  IHTGEKP+KCEECGK+F + S LT H  +H+  KPYKC+ECGK F+    LT+H        P KCEECG+ F Y  + T H+K H   KP + E+    F+   H
Sbjct:  194 GKAFNRSSNLTKHKIVHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHK-RIHTGEKPYKCEECGKAFSVFSTLTKHKIIHTEEKPYKCEECGKAFNRSSHLTNHKVIHTGEKPYKCEECGKAFTKSSTLTYHKVIHTGKKPYKCEECGKAFSIFSILTKHKVIHTEDKPYKCEECGKTFNYSSNFTNHKKIHTGEKPYKCEECGKSFILSSH 426          

HSP 4 Score: 201.445 bits (511), Expect = 5.842e-62
Identity = 108/231 (46.75%), Postives = 143/231 (61.90%), Query Frame = 0
Query:    2 NKTFTKRFSLKRHLVLHTGEKPFKCDECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTRHTEALCGVMPLKCEECGRRFKYVESLTKHQKTHEA-KPCQREKVXSLFVE 231
             K+F     L +H ++HTGEKP+KC+ECGK F     LT H I H+G KP+KCEEC ++F     L  H I +H G + + C+ECGK+F   S LT+H +VH+  +P KCEECGK F+   NL +H +IHTGEKP+KC ECGK+F   S LT H  +H+  KPYKC+ECGK F+   +LT+H        P KCEECG+ F     LT H+  H   KP + E+    F +
Sbjct:  110 GKSFCMLSQLTQHEIIHTGEKPYKCEECGKAFKKSSNLTNHKIIHTGEKPYKCEECGKAFNQSSTLTRHKI-IHTGEKLYKCEECGKAFNRSSNLTKHKIVHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHKRIHTGEKPYKCEECGKAFSVFSTLTKHKIIHTEEKPYKCEECGKAFNRSSHLTNHKVIHTGEKPYKCEECGKAFTK 339          

HSP 5 Score: 181.8 bits (460), Expect = 1.482e-54
Identity = 91/195 (46.67%), Postives = 122/195 (62.56%), Query Frame = 0
Query:    2 NKTFTKRFSLKRHLVLHTGEKPFKCDECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTRHTEALCGVMPLKCE 196
             K F +   L  H V+HTGEKP+KC+ECGK F     LT H + H+G KP+KCEEC ++F  +  L  H + +H   +P+ C+ECGK+F   S  T H  +H+  +P KCEECGK F    +L  H  IHTGEKP+KC+ECGK+F Q S L +H  +H+  KPYKC+ECGK F +  +LT+H        P KC+
Sbjct:  306 GKAFNRSSHLTNHKVIHTGEKPYKCEECGKAFTKSSTLTYHKVIHTGKKPYKCEECGKAFSIFSILTKHKV-IHTEDKPYKCEECGKTFNYSSNFTNHKKIHTGEKPYKCEECGKSFILSSHLTTHKIIHTGEKPYKCKECGKAFNQSSTLMKHKIIHTGEKPYKCEECGKAFNQSPNLTKHKRIHTKEKPYKCK 499          

HSP 6 Score: 171.014 bits (432), Expect = 2.333e-50
Identity = 99/221 (44.80%), Postives = 129/221 (58.37%), Query Frame = 0
Query:   16 VLHTGEKPFKCDECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGQPFNCKECGKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTRHTEALCGVMPLKCEECGRRFKYVESLTKHQKTHEA-KPCQRE---KVXSLFVEL 232
            V  T  K  +CD+  K F       +H I+H+G  PFKC+EC +SF     L  H I +H G +P+ C+ECGK+F   S LT H ++H+  +P KCEECGK F     L  H  IHTGEK +KCEECGK+F + S LT+H  VH+  KPYKC+ECGK F +  +LT H +   G  P KC ECG+ F     LT H++ H   KP + E   K  S+F  L
Sbjct:   68 VTTTQSKIVQCDKYVKVFHKYSNAKRHKIRHTGKNPFKCKECGKSFCMLSQLTQHEI-IHTGEKPYKCEECGKAFKKSSNLTNHKIIHTGEKPYKCEECGKAFNQSSTLTRHKIIHTGEKLYKCEECGKAFNRSSNLTKHKIVHTGEKPYKCEECGKAFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHKRIHTGEKPYKCEECGKAFSVFSTL 287          
The following BLAST results are available for this feature:
BLAST of TCONS_00055685-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7082.996e-6749.79Zinc finger protein 708 OS=Homo sapiens GN=ZNF708 ... [more]
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