Zinc finger UBP type protein (polypeptide) - C. hemisphaerica

Overview
NameZinc finger UBP type protein
Unique NameTCONS_00056650-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length813

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056650-protein ID=TCONS_00056650-protein|Name=Zinc finger UBP type protein|organism=Clytia hemisphaerica|type=polypeptide|length=813bp
MDVLSEELKLKLTKYNYTIPQGGNTVYKDECIYCFDGQESDNGMNVCLST
LFGVSQKFLQLFVKKEGKTVFLNFKKVPKEVSVEEPPVEKRPTKMAIGVE
GGFDVEKDKVEYECVNTLIVTDNEGKITNELTLPNPDLPLNLQCCIAGVI
AHQGASMQENVQAWEEKRIVSKYALNLQQLDNGVKIPPSGWKCALCDLTQ
NLWLNLTDGTILCGRKFWDGSGGNNHAVEYYEQTKYPLAVKLGTITAEGG
DVYSYDEDDMVEDPKLKEHLLHFGINIALLEKTDKTMTELEVEANLSLKA
EWDTIQEAGKKLKPLNGPGYTGMINLGNSCYMNSIMQILFSMTEFQQKYA
NCSDQIFQNEKGDPTSSFNVQTAKLGAGLLSGDYSQKQTNEQGEEDDGTQ
GVRPQMFKSLIGRGHAEFSTNHQQDAQEFFLHFMDKMEKEERNEDVKLKK
LFMFQLEDRVQCTSSQQVAYKKREEMMISLPIPLDKATNIGEFKAFEERK
KQAETNKERIPTEEIVRLKIPMSECLNEFTADESVEQFYSTAIKRKITAL
KRTRFATFPDYLVIQLRRFTVGDDWVPKKLDVSVEMEEMIDLNSLRGNGL
QSNETQLPDDDGGEEETTVEINEGFVAQLMDMGFPLEACKKAVHYTNNQG
VEAAMNWVFEHSQDVDFASPLQLGGGGKEKKKTETFTPNIESVSMLMAMG
FTDQQAHKALKKTNNNLEAAAEWMFSNPDELNTSMEVDEPAAESSLTENT
MHDGNGKYKLMGFASHMGTSTSCGHYVCHIYKEGRWVIYNDRKVAESETP
PRDLGYIYFYKRI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035680XLOC_035680Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056650TCONS_00056650Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR015940UBA
IPR016652Ubiquitinyl_hydrolase
IPR013083Znf_RING/FYVE/PHD
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0005515 protein binding
molecular_function GO:0004843 thiol-dependent ubiquitin-specific protease activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001607Zinc finger, UBP-typeSMARTSM00290Zf_UBP_1coord: 192..247
e-value: 3.6E-20
score: 83.0
IPR001607Zinc finger, UBP-typePFAMPF02148zf-UBPcoord: 193..265
e-value: 2.0E-15
score: 56.8
IPR001607Zinc finger, UBP-typePROSITEPS50271ZF_UBPcoord: 191..263
score: 16.554
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 689..726
e-value: 1.2E-12
score: 58.1
coord: 622..660
e-value: 3.0E-8
score: 43.4
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 691..723
e-value: 1.0E-10
score: 41.2
coord: 626..657
e-value: 2.1E-9
score: 37.0
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 620..661
score: 12.041
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 687..727
score: 14.113
IPR016652Ubiquitinyl hydrolasePIRSFPIRSF016308UBPcoord: 5..813
e-value: 5.7E-276
score: 915.7
NoneNo IPR availableGENE3D3.90.70.10coord: 308..813
e-value: 5.6E-79
score: 264.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..402
NoneNo IPR availableCDDcd14386UBA2_UBP5coord: 688..730
e-value: 1.58972E-17
score: 76.9881
NoneNo IPR availableCDDcd14294UBA1_UBP5_likecoord: 623..666
e-value: 3.97775E-22
score: 90.0643
NoneNo IPR availableCDDcd02658Peptidase_C19Bcoord: 322..811
e-value: 2.64512E-107
score: 333.136
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 169..277
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 317..483
coord: 714..813
coord: 525..654
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 158..264
e-value: 9.9E-19
score: 66.8
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 321..810
e-value: 3.8E-46
score: 157.6
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 322..337
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 758..776
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 321..813
score: 44.152
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 681..727

Blast
[Close]
BLAST of Zinc finger UBP type protein vs. Swiss-Prot (Human)
Match: UBP5 (Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sapiens GN=USP5 PE=1 SV=2)

HSP 1 Score: 816.224 bits (2107), Expect = 0.000e+0
Identity = 418/865 (48.32%), Postives = 589/865 (68.09%), Query Frame = 0 
Query:    1 MDVLSEELKLKLTKYNYTIPQGGNTVYKDECIYCFDGQESDNGMNVCLSTLFGVSQKFLQLFVKKEGKTVFLNFKKV--PKEVSVEEP------PVEKRPTKMAIGVEGGFDVEKDKVEYECVNTLIVTDNEGKITNELTLPNPDLPLN-LQCCIAGVIAHQGASMQENVQAWE-EKRIVSKYALNLQQLDNGVKIPPSGWKCALCDLTQNLWLNLTDGTILCGRKFWDGSGGNNHAVEYYEQTKYPLAVKLGTITAEGGDVYSYDEDDMVEDPKLKEHLLHFGINIALLEKTDKTMTELEVEANLSLKAEWDTIQEAGKKLKPLNGPGYTGMINLGNSCYMNSIMQILFSMTEFQQKYANCSDQIFQNEKGDPTSSFNVQTAKLGAGLLSGDYSQKQTNEQG------EEDDGTQGVRPQMFKSLIGRGHAEFSTNHQQDAQEFFLHFMDKMEKEERNEDVKLKKLFMFQLEDRVQCTSSQQVAYKKREEMMISLPIPLDKATNIGEFKAFEERKKQAETNKERIPTEEIVRLKIPMSECLNEFTADESVEQFYSTAIKRKITALKRTRFATFPDYLVIQLRRFTVGDDWVPKKLDVSVEMEEMIDLNSLRGNGLQSNETQLPD--------DD--------GGEEE-----------TTVEINEGFVAQLMDMGFPLEACKKAVHYTNNQGVEAAMNWVFEHSQDVDFASPLQL-GGGGKEKKKTETFTPNIESVSMLMAMGFTDQQAHKALKKTNNNLEAAAEWMFSNPDELN--TSMEVDE-PAAESSLTENT-----MHDGNGKYKLMGFASHMGTSTSCGHYVCHIYKEGRWVIYNDRKVAESETPPRDLGYIYFYKRI 813
            M  LSEE  L +      +P+ G+ V+KDEC + FD  ES+ G+ +C++T  G  +++++    K G+ V+L+ ++   PKE   E+P      P  K+PT++AIGVEGGFD+ ++K E +    +++  +  +I  +     PD+  + +   +  +++   AS ++ VQAW+ E R VSK+A +L+QLDN  +IPP GWKC+ CD+ +NLWLNLTDG+ILCGR+++DGSGGNNHAVE+Y +T YPLAVKLGTIT +G DVYSYDEDDMV DP L EHL HFGI++  ++KTDKTMTELE++ N  +  EW+ IQE+G  LKPL GPGYTG+ NLGNSCY+NS++Q+LFS+ +FQ+KY +  ++IFQN   DPT  F+ Q AKLG GLLSG+YS K   E G      E+ +   G+ P+MFK+LIG+GH EFSTN QQDAQEFFLH ++ +E+  R+ +    ++F F +E++++C ++++V Y +R + ++ LP+P+D A N  E   +EE+K+QAE  K  +P  E+VR ++P S CL  + A E V+ F+STA++ K  A+K TRFA+FPDYLVIQ+++FT G DWVPKKLDVS+EM E +D++ LRG GLQ  E +LPD        D+        G E+E           T+  ++E  + QL++MGFP++AC+KAV+YT N G EAAMNWV  H  D DFA+PL L G  G          P  + V+ +++MGF+  QA KAL+ TNN+LE A +W+FS+ D+L+   +M++ E  +A  S++E+      + DG GKY+L  F SHMGTST CGHYVCHI KEGRWVIYND+KV  SE PP+DLGYIYFY+R+
Sbjct:    1 MAELSEEALLSVLP-TIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTGQRVYLHLRRTRRPKE---EDPATGTGDPPRKKPTRLAIGVEGGFDLSEEKFELDEDVKIVILPDYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPDGADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRI-GEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLLSGEYS-KPVPESGDGERVPEQKEVQDGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVERNCRSSE-NPNEVFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEKKRQAEEEKMALP--ELVRAQVPFSSCLEAYGAPEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDISQLRGTGLQPGEEELPDIAPPLVTPDEPKGSLGFYGNEDEDSFCSPHFSSPTSPMLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRV 856
The following BLAST results are available for this feature:
BLAST of Zinc finger UBP type protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP50.000e+048.32Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sa... [more]
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