TCONS_00057172-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057172-protein
Unique NameTCONS_00057172-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057172-protein ID=TCONS_00057172-protein|Name=TCONS_00057172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=166bp
MALSFSRRLLKVNNLRAIQTVVQSRNYAEASGSALNLTFGTPTQAYFNEE
PVTQVDVPSGSGNFSILAQHVPIIAALRPGLMTVFSEGNAQKFFVSSGTI
TVNSDSSAQILAEEAQPIENFDADAARRTADAARTALASAADEAGKAEAQ
IQLDTCEALLNALEGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036029XLOC_036029Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057172TCONS_00057172Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020546ATP_synth_F1_dsu/esu_N
IPR001469ATP_synth_F1_dsu/esu
IPR020547ATP_synth_F1_dsu/esu_C
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..166
NoneNo IPR availableGENE3D1.20.5.440coord: 122..163
e-value: 3.2E-8
score: 33.0
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalGENE3D2.60.15.10coord: 33..121
e-value: 1.1E-23
score: 82.8
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 36..115
e-value: 2.3E-16
score: 59.4
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalPRODOMPD000944coord: 41..119
e-value: 5.0E-22
score: 255.0
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalSUPERFAMILY51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 35..116
IPR001469ATP synthase, F1 complex, delta/epsilon subunitTIGRFAMTIGR01216TIGR01216coord: 41..164
e-value: 1.1E-20
score: 72.0
IPR001469ATP synthase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 33..162
score: 15.292
IPR001469ATP synthase, F1 complex, delta/epsilon subunitCDDcd12152F1-ATPase_deltacoord: 35..158
e-value: 1.58935E-22
score: 86.7968
IPR020547ATP synthase delta/epsilon subunit, C-terminal domainSUPERFAMILY46604Epsilon subunit of F1F0-ATP synthase C-terminal domaincoord: 121..162

Blast
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BLAST of TCONS_00057172-protein vs. Swiss-Prot (Human)
Match: ATPD (ATP synthase subunit delta, mitochondrial OS=Homo sapiens GN=ATP5D PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.850e-38
Identity = 66/131 (50.38%), Postives = 89/131 (67.94%), Query Frame = 0 
Query:   35 LNLTFGTPTQAYFNEEPVTQVDVPSGSGNFSILAQHVPIIAALRPGLMTVFSE-GNAQKFFVSSGTITVNSDSSAQILAEEAQPIENFDADAARRTADAARTALASAADEAGKAEAQIQLDTCEALLNALE 164
            ++ TF +PTQ +FN   V QVDVP+ +G F ILA HVP +  LRPGL+ V +E G   K+FVSSG+I VN+DSS Q+LAEEA  ++  D  AA+   + A+  L   ADEA +AE QI+++  EAL+ ALE
Sbjct:   38 MSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEALVKALE 168
The following BLAST results are available for this feature:
BLAST of TCONS_00057172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATPD3.850e-3850.38ATP synthase subunit delta, mitochondrial OS=Homo ... [more]
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