Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00057172-protein ID=TCONS_00057172-protein|Name=TCONS_00057172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=166bp MALSFSRRLLKVNNLRAIQTVVQSRNYAEASGSALNLTFGTPTQAYFNEE PVTQVDVPSGSGNFSILAQHVPIIAALRPGLMTVFSEGNAQKFFVSSGTI TVNSDSSAQILAEEAQPIENFDADAARRTADAARTALASAADEAGKAEAQ IQLDTCEALLNALEGK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0015986 ATP synthesis coupled proton transport
Vocabulary: Molecular Function
Term Definition
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Cellular Component
Term Definition
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0015986
ATP synthesis coupled proton transport
cellular_component
GO:0045261
proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function
GO:0046933
proton-transporting ATP synthase activity, rotational mechanism
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
M A L S F S R R L L K V N N L R A I Q T V V Q S R N Y A E A S G S A L N L T F G T P T Q A Y F N E E P V T Q V D V P S G S G N F S I L A Q H V P I I A A L R P G L M T V F S E G N A Q K F F V S S G T I T V N S D S S A Q I L A E E A Q P I E N F D A D A A R R T A D A A R T A L A S A A D E A G K A E A Q I Q L D T C E A L L N A L E G K 20 40 60 80 100 120 140 160 Score = Expect = 3.2E-8 / Score = 33.0 Expect = 1.1E-23 / Score = 82.8 Expect = 2.3E-16 / Score = 59.4 Expect = 5.0E-22 / Score = 255.0 Score = Expect = 1.1E-20 / Score = 72.0 Score = 15.292 Expect = 1.58935E-22 / Score = 86.7968 Score = Sequence Coil G3DSA:1.20.5.440 G3DSA:2.60.15.10 PF02823 PD000944 SSF51344 TIGR01216 MF_00530 cd12152 SSF46604
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 146..166
None No IPR available GENE3D 1.20.5.440 coord: 122..163 e-value: 3.2E-8 score: 33.0
IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GENE3D 2.60.15.10 coord: 33..121 e-value: 1.1E-23 score: 82.8
IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal PFAM PF02823 ATP-synt_DE_N coord: 36..115 e-value: 2.3E-16 score: 59.4
IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal PRODOM PD000944 coord: 41..119 e-value: 5.0E-22 score: 255.0
IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal SUPERFAMILY 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain coord: 35..116
IPR001469 ATP synthase, F1 complex, delta/epsilon subunit TIGRFAM TIGR01216 TIGR01216 coord: 41..164 e-value: 1.1E-20 score: 72.0
IPR001469 ATP synthase, F1 complex, delta/epsilon subunit HAMAP MF_00530 ATP_synth_epsil_bac coord: 33..162 score: 15.292
IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CDD cd12152 F1-ATPase_delta coord: 35..158 e-value: 1.58935E-22 score: 86.7968
IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SUPERFAMILY 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain coord: 121..162
Blast
BLAST of TCONS_00057172-protein vs. Swiss-Prot (Human)
Match:
ATPD (ATP synthase subunit delta, mitochondrial OS=Homo sapiens GN=ATP5D PE=1 SV=2)
HSP 1 Score: 127.872 bits (320), Expect = 3.850e-38
Identity = 66/131 (50.38%), Postives = 89/131 (67.94%), Query Frame = 0
Query: 35 LNLTFGTPTQAYFNEEPVTQVDVPSGSGNFSILAQHVPIIAALRPGLMTVFSE-GNAQKFFVSSGTITVNSDSSAQILAEEAQPIENFDADAARRTADAARTALASAADEAGKAEAQIQLDTCEALLNALE 164
++ TF +PTQ +FN V QVDVP+ +G F ILA HVP + LRPGL+ V +E G K+FVSSG+I VN+DSS Q+LAEEA ++ D AA+ + A+ L ADEA +AE QI+++ EAL+ ALE
Sbjct: 38 MSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEALVKALE 168
The following BLAST results are available for this feature:
BLAST of TCONS_00057172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M A L S F S R R L L K V N N L R A I Q T V V Q S R N Y A E A S G S A L N L T F G T P T Q A Y F N E E P V T Q V D V P S G S G N F S I L A Q H V P I I A A L R P G L M T V F S E G N A Q K F F V S S G T I T V N S D S S A Q I L A E E A Q P I E N F D A D A A R R T A D A A R T A L A S A A D E A G K A E A Q I Q L D T C E A L L N A L E G K 20 40 60 80 100 120 140 160 Expect = 3.85e-38 / Id = 50.38 Sequence ATPD
Match Name E-value Identity Description
ATPD 3.850e-38 50.38 ATP synthase subunit delta, mitochondrial OS=Homo ... [more]
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