TCONS_00057445-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057445-protein
Unique NameTCONS_00057445-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057445-protein ID=TCONS_00057445-protein|Name=TCONS_00057445-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
TEMKNEVFKNVEDQCSCAICLELADEAVECSHCHQVFCQKCIVGLEGCPS
CRQTPFTTQPNVILRRIFGSMITNCTNEGCKERPTRSNLTSHLEKCEWST
IECPNDGCDQKYQKFASEQHKRQCVYRLEACIGCGHQYKMLDLANHQDQC
LFVDVPCMNSNCNERFLRKDESSHISVCKQQMIRCSFCFFSDTRIQVLHH
TIDIHYQEAVGPMSSLAPRSFGASSHQP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036203XLOC_036203Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057445TCONS_00057445Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR001841Znf_RING
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 164..201
e-value: 1.6E-4
score: 21.3
coord: 65..118
e-value: 7.6E-9
score: 35.2
coord: 119..163
e-value: 2.0E-6
score: 27.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..64
e-value: 6.0E-6
score: 25.2
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 146..196
e-value: 2.3E-6
score: 28.1
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 146..188
score: 10.711
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 17..52
score: 10.704
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 17..54
e-value: 0.00938937
score: 31.6472
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 74..129
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 130..205
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 9..72

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057445-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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