TCONS_00057627-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057627-protein
Unique NameTCONS_00057627-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length323

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057627-protein ID=TCONS_00057627-protein|Name=TCONS_00057627-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
MSRTNLFLLNIITSAGNITMDTMQASNTNNFCLEIKVEEIFDSVEHTGNG
LTDNEITVAVTPREETSNSEELELIKIKVEDFFNTQDNNQCAPNTTELIQ
RSANLIQESSSSETRNLIIPQDDQRYKDNVSDHQPSNDAIVNQTGNPLKM
DTAPPTKLVIDRNYQKFKHNLFNTPSIPMYQNTETTSRVSSNSNEVSKAF
PCLLCAESFLLKKELEQHIIEAHESVLYECKICGKKYKDKNVFKIHFQRH
GKTFQCKECGKILRSQSTLKNHAYTHQKVKPYKCRFCDKTFAYSNGRNYH
IKTHHLEEQGLNPKKQDFKFHSC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036345XLOC_036345Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057627TCONS_00057627Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 200..223
e-value: 3.0
score: 16.8
coord: 282..304
e-value: 0.014
score: 24.6
coord: 228..250
e-value: 0.004
score: 26.4
coord: 254..276
e-value: 0.0066
score: 25.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 230..250
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 202..223
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 256..276
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 284..305
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 254..281
score: 12.84
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 282..309
score: 10.824
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 228..250
score: 9.411
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 252..304
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 198..250
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 254..276
e-value: 5.1E-4
score: 20.3
NoneNo IPR availableGENE3D3.30.160.60coord: 263..291
e-value: 3.8E-14
score: 52.1
NoneNo IPR availableGENE3D3.30.160.60coord: 99..212
e-value: 0.065
score: 13.1
NoneNo IPR availableGENE3D2.20.28.10coord: 238..262
e-value: 5.9E-4
score: 19.1
NoneNo IPR availableGENE3D3.30.160.60coord: 213..237
e-value: 4.7E-8
score: 32.8
NoneNo IPR availableGENE3D3.30.160.60coord: 292..321
e-value: 3.3E-4
score: 20.1
NoneNo IPR availablePFAMPF12874zf-metcoord: 228..248
e-value: 0.011
score: 16.0

Blast
[Close]
BLAST of TCONS_00057627-protein vs. Swiss-Prot (Human)
Match: ZFP37 (Zinc finger protein 37 homolog OS=Homo sapiens GN=ZFP37 PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.107e-16
Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 0 
Query:  189 VSSNSNEVSKAFPCLLCAESFLLKKELEQHIIEAHESVLYECKICGKKYKDKNVFKIHFQRHG--KTFQCKECGKILRSQSTLKNHAYTHQKVKPYKCRFCDKTFAYSNGRNYHIKTH 304
            V S++ E  K + C  C +SF     L +H+      + YEC  CGK +K  +    H + H   K F+C ECGK    +S L  H  TH K KPYKC  C K F +S+   YH++TH
Sbjct:  396 VRSHTGE--KPYECKECGKSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYSSSLTKHMRIHTGEKPFECNECGKAFSKKSHLIIHQRTHTKEKPYKCNECGKAFGHSSSLTYHMRTH 511
The following BLAST results are available for this feature:
BLAST of TCONS_00057627-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFP373.107e-1638.14Zinc finger protein 37 homolog OS=Homo sapiens GN=... [more]
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