TCONS_00057871-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057871-protein
Unique NameTCONS_00057871-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057871-protein ID=TCONS_00057871-protein|Name=TCONS_00057871-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
YCMSKAALDQFTRAAAIELGADQVRVNCVNPSIIATEKCSNSSDPSVKAA
MERSKMTHALGRAGTVDEVAAAILFLASGAASYITGATFPIDGGRSVMIP
V
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036483XLOC_036483Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057871TCONS_00057871Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 59..79
score: 39.55
coord: 22..39
score: 34.24
coord: 1..20
score: 38.76
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 1..94
e-value: 2.2E-27
score: 96.0
NoneNo IPR availableGENE3D3.40.50.720coord: 1..101
e-value: 1.1E-29
score: 102.9
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..98

Blast
[Close]
BLAST of TCONS_00057871-protein vs. Swiss-Prot (Human)
Match: DCXR (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 9.913e-17
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 0 
Query:    1 YCMSKAALDQFTRAAAIELGADQVRVNCVNPSIIATEKC-SNSSDPSVKAAMERSKMTHALGRAGTVDEVAAAILFLASGAASYITGATFPIDGG 94
            YC +K ALD  T+  A+ELG  ++RVN VNP+++ T    +  SDP  KA    +++   LG+   V+ V  AILFL S  +   TG+T P++GG
Sbjct:  149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH-KAKTMLNRI--PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240
The following BLAST results are available for this feature:
BLAST of TCONS_00057871-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCXR9.913e-1741.05L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
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