TCONS_00058682-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058682-protein
Unique NameTCONS_00058682-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length308

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058682-protein ID=TCONS_00058682-protein|Name=TCONS_00058682-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
FEKTIIYCRTIDKVTDVHRYFSVAFENEGAQLPFTVYHGKLTRKCREKAL
SDFVARDGKTRVLIGTSAIGMGIDIPDIRTVLFYGVPSDIESLVQGIGRG
GRDGELCECVLFVRPCDHNLAKEDKHLKNYIENTTMCRRKIMMLAFSHKP
IGPAVKHLCCDICQSKCYCEVCEAPPSRKFTENVSVILPKRNVTPSQRAL
VREMLNECNSLNGDQGVLSTASVTSIIPEHVITEITEKCEFIFEIEYIKC
NFQLFDEETELLVLGVICDTFNDFEIPDDYFEKAKGICPTSLKTFDQLID
LNADVQTA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036971XLOC_036971Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058682TCONS_00058682Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 21..104
e-value: 6.1E-17
score: 72.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..103
e-value: 2.4E-20
score: 72.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..152
score: 17.953
NoneNo IPR availableGENE3D3.40.50.300coord: 1..167
e-value: 2.4E-31
score: 108.2
NoneNo IPR availableCDDcd00079HELICccoord: 1..112
e-value: 1.09474E-21
score: 87.2932
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..127

Blast
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BLAST of TCONS_00058682-protein vs. Swiss-Prot (Human)
Match: WRN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.287e-17
Identity = 65/192 (33.85%), Postives = 88/192 (45.83%), Query Frame = 0 
Query:    4 TIIYCRTIDKVTDVHRYFSVAFENEGAQLPFTVYHGKLTRKCREKALSDFVARDGKTRVLIGTSAIGMGIDIPDIRTVLFYGVPSDIESLVQGIGRGGRDGELCECVLFVRPCDHNLAKEDKHLKNYIEN-------------------TTMCRRKIMMLAFSHKPIGPAVKHL-----CCDICQSK---CY 168
            TIIYC +  K+T       V  E     L    YH  ++   R+     FV RD + + +I T A GMGI+  DIR V+ YG P D+ES  Q IGR GRDG    C +   P D NL   ++HL   I N                   ++ CRR+I++  F  K +  A   +     CCD C+S+   CY
Sbjct:  767 TIIYCPS-RKMTQ-----QVTGELRKLNLSCGTYHAGMSFSTRKDIHHRFV-RD-EIQCVIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPADINL---NRHLLTEIRNEKFRLYKLKMMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCRSRLDHCY 947
The following BLAST results are available for this feature:
BLAST of TCONS_00058682-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WRN3.287e-1733.85Werner syndrome ATP-dependent helicase OS=Homo sap... [more]
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