TCONS_00059252-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059252-protein
Unique NameTCONS_00059252-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1262

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059252-protein ID=TCONS_00059252-protein|Name=TCONS_00059252-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1262bp
MRLILWFAFIYFISAQTLVEGNYVENFKGVNYILSSNFKTWQDAENDCIA
RGGHLTSVHSQEENNFLNTLINTRTTPSSTIWYGGHRNANRDFVWSDGTT
FSWTAWNGGEPNGRFTENCLHRLSNGLWNDLRCGQTFQYICKLDKVATTT
TTTTTTTTTPSLPHIVNDTCQPHFLDASSTIWQRSTGFSIEPGASGQRCD
RQIKTGWYRFKSPAGSIMPEQCPNINSCGTTLPIWLNGSHPTEVNVSTSV
PVCVVYPGNCCGHKYNIDIKRCQDEVQGEDYFVYNLPATPGCPMSYCIGN
ETRCPDGERSPNGFSPGCTNEFPKLKGKPEVTVGSHDNRIRFTCDFEPEQ
IKNNAKYKVSWYTRTSDGNAELVKTETLHGNQTKSFLQKTDGQKFCLQKN
FFCEVSSVFPDSEDISDTKRSDDFFAGIKISPTTIDLAENDAPKELKFET
TVPITCDPFFPDCAVDIEVAQTQNDGVLSFCKISFKKGPAGQVKTMEVVA
KRDFIDDGDKSMKIKFHIPLTLFVPDWKCHAELPDVTVHTKDVTTANCYS
NGDPHITTFDNRRFDHYRVGDYVYTKSGARLFEVHVRTFVCASVSCNCGV
AAREGDDVMVVDMCRDNVPRARFASTVEPQPGTKINRSPDGKVFEFSFPS
GASVRFEARRWFGNTYYANIVVKLPSDDYKNTSGLCGIWDSSSTNDLTSK
EGQIFQGGGQAPLGFTESWKLTPGSSLFYHRGGPQKCLAERFKTYCFCSE
NAQNNQVINCTTNAIVDRPKYIVGNNQYQELNFPGAEHCGKRRRRRRDVE
TQKTLILPDDGEDAVYFYDPIQPNKTIPSFPTPNGITEERAILNCDKALR
ESESGKVCLELVPDLDIDGIIESCVEDTKILDDTEVATSSAVGVMKDACE
EVTLRNITLWKTDDTTGQLQPPKAVAEILCPNECSGNGYCANATCVCDEG
YLSADCSIHEDDPPVLVKVAFNGLCDIRQKDCVRTRVIGRNFINSESLAC
QTKALKFTTDHSIDEEFNGEATIQSSELLSFAELSCDLPDVPVDIVFSST
QKGIPVGGFDIRLSNNGENFSNESSQFVVYDSKCLQCNATTKDCLWKEDS
CRVNNYCVGKGDAHPLDWCKVCSGENAFEPRYDNLAPVFRPTEPIKVFKD
QEMSFVIPVFDPEQKKMKYELIEPPSPPPGMEISNGGVLTWTPKEENKTF
TVWIKVTDICGNSSYSTYDFEVVNCPCQAFNGAECQRSDNGTISCVCPAG
CTGKKYEKRLDH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037309XLOC_037309Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059252TCONS_00059252Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR001846VWF_type-D
IPR016186C-type_lectin-like/link
IPR013783Ig-like_fold
IPR018378C-type_lectin_CS
IPR007110Ig-like_dom
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 19..142
e-value: 1.8E-24
score: 97.3
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 39..142
e-value: 4.2E-16
score: 59.5
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 27..142
score: 23.322
IPR001846von Willebrand factor, type D domainSMARTSM00216VWD_2coord: 541..702
e-value: 0.0026
score: 22.2
IPR001846von Willebrand factor, type D domainPFAMPF00094VWDcoord: 548..702
e-value: 9.6E-9
score: 35.6
IPR001846von Willebrand factor, type D domainPROSITEPS51233VWFDcoord: 547..763
score: 18.549
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 19..151
e-value: 5.3E-32
score: 110.4
NoneNo IPR availableGENE3D2.60.40.1510coord: 349..957
e-value: 4.5E-7
score: 29.8
NoneNo IPR availableCDDcd00037CLECTcoord: 32..142
e-value: 4.6257E-28
score: 110.402
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1128..1224
e-value: 5.0E-10
score: 39.4
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 119..141
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 323..416
score: 6.687
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 30..158

Blast
BLAST of TCONS_00059252-protein vs. Swiss-Prot (Human)
Match: VWDE (von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4)

HSP 1 Score: 217.238 bits (552), Expect = 5.137e-57
Identity = 172/580 (29.66%), Postives = 263/580 (45.34%), Query Frame = 0
Query:  199 CDRQIKTGWYRF---KSPAGSIMPEQCPNINSCGTTLPIWLNGS------HPTEVNVSTSVPVCVVYP------GNCCGHKYNIDIKRCQDEVQGEDYFVYNLPATPGCPMSYCIG--NETR---CPDGERSPNGFSPGCTNEF-----PKLKGKPEVTVGSHDNRIRFTCDFEPEQIKNNAKYKVSWYTRTSDGNAELVKTETLHGNQTKSF-LQKTDGQKFCLQKNFFCEVSSVFPDSEDISDTK-RSDDFFAGIKISPTTIDLAENDAPKELKFETTVPITCDPFFP---DCAVDIEVAQTQNDG--------VLSFCKISFKKGPAGQVKT-----MEVVAKRDFIDDGDKSMKIKFHIPLTLFVPDWKCHAELPD-VTVHTKDVTTANCYSNGDPHITTFDNRRFDHYRVGDYVYTKSGARLFEVHVRTFVCAS----VSCNCGVAAREGDDVMVVDMCRDNVPRAR---FASTVEPQPGTKINRSPDGKVFEFSFPSGASVRFEARRWFGNTYYANIVVKLPSDDYKNTSGLCGIWDSSSTNDLTSKEGQIFQGGGQAPLGFTESWKLTPGSSL 727
            CD  +  GWYRF     PA   MP +C  +N CGT  PIWL+         P E+   T+   C  +        +CC  +  + ++ C +      + VY L  T GC M YC    ++ R   C   E    G    C  +      P   G+PEV V   ++R+   C F+    KN+  + ++W    S  +++ VK E       ++F L + DG    L    FC  S  F ++  +      S +FFAG K+ P    ++E+     L+ E+TVPI C  F     +C + +++ +T   G         LS C +   +  +    T     +   A  DF  DGD+   I   +   +   D+  +  +PD + +  KDV TA CY+  DPHI TFD R +D+++ G +V  KS +R FEVHVR + C S    VSCNCG  A+EG D++  DMC   +  ++   F  + +     KI+ S  G+     F SGA +R +   W       ++ ++ PS DY+NT GLCG +D +  ND   K G          + F   W++ PG S+
Sbjct:   55 CDHSLSPGWYRFLILDRPAE--MPTKCVEMNHCGTQAPIWLSLRDSETLPSPGEIKQLTA---CATWQFLFSTTKDCCLFQIPVSVRNCGN------FSVYLLQPTQGC-MGYCAEAISDARLHPCGSDETETGG---DCVRQLAASLPPPPAGRPEVLVELIESRLFCRCSFDVPATKNSVGFHIAW----SRLSSQEVKEELTQETTVQAFSLLELDGINLRLGDRIFCSASVFFLENPHVQSVAIESQEFFAGFKLQPELSTISEDGKEYYLRIESTVPIICSEFSELDQECKISLKL-KTIGQGREHLGLNLALSSCHVDLLQTSSCANGTCSHTFVYYTAVTDFSRDGDRVSNI---VVQPIVNEDFLWNNYIPDSIQIKVKDVPTAYCYTFTDPHIITFDGRVYDNFKTGTFVLYKSMSRDFEVHVRQWDCRSLHYPVSCNCGFVAQEGGDIVTFDMCNGQLRESQPYLFIKSQDVTRNIKISESYLGRKVTIWFSSGAFIRADLGEW-----GMSLTIRAPSVDYRNTLGLCGTFDENPENDFHDKNGMQIDQNFNNYVAFINEWRILPGKSM 606          

HSP 2 Score: 166.007 bits (419), Expect = 3.572e-41
Identity = 126/463 (27.21%), Postives = 210/463 (45.36%), Query Frame = 0
Query:  810 DGEDAVYFY-----DPIQPNKTIPSFPTPNGITEERAILNCDKALRESESGKVCLELVPDLDIDGIIESCVEDTKILDDTEVATSSAVGVMKDACEEVTLRNITLWKTDDTTGQLQPPKAVAEILCPNECSGNGYCANATCVCDEGYLSADCSIHEDDPPVLVKVAFNGLCDIRQKDCVRTRVIGRNFINSESLACQTKALKFTTDHSIDEEFNGEATIQSSELLSFAELSCDLPDVPVDIVFSSTQKGIPVGGFDIRLSNNGENFSNESSQFVVYDSKCLQCNATTKD-CLWKEDSCRVNNYCVGKGDAHPLDWCKVCSGE-NAFEPRY--DNLAPVFRPTE-PIKVFKDQEMSFVIPVFDPEQKKMKYELIEPPSPPPGMEISNGGVLTWTPKEENKTFTVWIKVTDICGNSSYSTYDFEVVNCPCQAFNGAECQRSDN-----GTISCVCPAGCTGKKYE 1257
            D E+  YF+     + +Q  +  PS+PTP+G+TE   +  C + L  S  G++CL  +    +D +IE CV+D  + DD   A  + V ++++ CE+  +     + T++    ++   +V +  CPN CSGNG C    C C   + S DCS   D  P + ++   G CD+++ +C+  RV G+ F    S+ C+   L++ +     E   GE     +   +   + C LP             G P G + +++SN+G  FSN     V+YD  C  C     D C  KE+ C ++  C  +GD +P   C +C  + + F   +  +N  PV +  +  ++ F  +   +    FDPE   + + L    S P G  +S+ G+  W   +   T  + +++ D C   +  T +  V +C C   NG  C    N     G   CVC  G  G   E
Sbjct:  771 DLEELTYFFPEDHAEDVQ-QEFFPSWPTPSGLTEYSTLTLCQETLANSSIGRLCLAFLGK-RLDSVIEMCVKDVLLKDDLSWA-EAGVALLENECEKRIVEE-GKYNTEEYGTSIEDILSVLK--CPNLCSGNGQCMEWGCACSPSFSSYDCSDSYDKAPEITELGNAGFCDVQKYNCMMVRVFGKGFKELPSIKCEVTKLQYNS----SEWMPGEPIYTQTVFHNSRAVDCQLPTDVQQFDTMDLVGGKPTGKWQLKVSNDGYKFSNPKIT-VIYDGACQVCGLYKNDSCTIKENVCIIDGLCYVEGDKNPTSPCLICRPKISRFTWSFLENNQPPVIQALQDKLQTFYGENFEYQFVAFDPEGSDIHFTL---DSGPEGASVSSAGLFMWK-TDLLTTQQITVRLNDDCDAETRVTIEVTVKSCDC--LNGGSCVSDRNFSPGSGVYLCVCLPGFHGSLCE 1216          
The following BLAST results are available for this feature:
BLAST of TCONS_00059252-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VWDE5.137e-5729.66von Willebrand factor D and EGF domain-containing ... [more]
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