TCONS_00059252-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059252-protein
Unique Name	TCONS_00059252-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1262

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059252-protein ID=TCONS_00059252-protein|Name=TCONS_00059252-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1262bp
MRLILWFAFIYFISAQTLVEGNYVENFKGVNYILSSNFKTWQDAENDCIA
RGGHLTSVHSQEENNFLNTLINTRTTPSSTIWYGGHRNANRDFVWSDGTT
FSWTAWNGGEPNGRFTENCLHRLSNGLWNDLRCGQTFQYICKLDKVATTT
TTTTTTTTTPSLPHIVNDTCQPHFLDASSTIWQRSTGFSIEPGASGQRCD
RQIKTGWYRFKSPAGSIMPEQCPNINSCGTTLPIWLNGSHPTEVNVSTSV
PVCVVYPGNCCGHKYNIDIKRCQDEVQGEDYFVYNLPATPGCPMSYCIGN
ETRCPDGERSPNGFSPGCTNEFPKLKGKPEVTVGSHDNRIRFTCDFEPEQ
IKNNAKYKVSWYTRTSDGNAELVKTETLHGNQTKSFLQKTDGQKFCLQKN
FFCEVSSVFPDSEDISDTKRSDDFFAGIKISPTTIDLAENDAPKELKFET
TVPITCDPFFPDCAVDIEVAQTQNDGVLSFCKISFKKGPAGQVKTMEVVA
KRDFIDDGDKSMKIKFHIPLTLFVPDWKCHAELPDVTVHTKDVTTANCYS
NGDPHITTFDNRRFDHYRVGDYVYTKSGARLFEVHVRTFVCASVSCNCGV
AAREGDDVMVVDMCRDNVPRARFASTVEPQPGTKINRSPDGKVFEFSFPS
GASVRFEARRWFGNTYYANIVVKLPSDDYKNTSGLCGIWDSSSTNDLTSK
EGQIFQGGGQAPLGFTESWKLTPGSSLFYHRGGPQKCLAERFKTYCFCSE
NAQNNQVINCTTNAIVDRPKYIVGNNQYQELNFPGAEHCGKRRRRRRDVE
TQKTLILPDDGEDAVYFYDPIQPNKTIPSFPTPNGITEERAILNCDKALR
ESESGKVCLELVPDLDIDGIIESCVEDTKILDDTEVATSSAVGVMKDACE
EVTLRNITLWKTDDTTGQLQPPKAVAEILCPNECSGNGYCANATCVCDEG
YLSADCSIHEDDPPVLVKVAFNGLCDIRQKDCVRTRVIGRNFINSESLAC
QTKALKFTTDHSIDEEFNGEATIQSSELLSFAELSCDLPDVPVDIVFSST
QKGIPVGGFDIRLSNNGENFSNESSQFVVYDSKCLQCNATTKDCLWKEDS
CRVNNYCVGKGDAHPLDWCKVCSGENAFEPRYDNLAPVFRPTEPIKVFKD
QEMSFVIPVFDPEQKKMKYELIEPPSPPPGMEISNGGVLTWTPKEENKTF
TVWIKVTDICGNSSYSTYDFEVVNCPCQAFNGAECQRSDNGTISCVCPAG
CTGKKYEKRLDH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037309	XLOC_037309	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059252	TCONS_00059252	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001304	C-type_lectin-like
IPR001846	VWF_type-D
IPR016186	C-type_lectin-like/link
IPR013783	Ig-like_fold
IPR018378	C-type_lectin_CS
IPR007110	Ig-like_dom
IPR016187	CTDL_fold

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001304	C-type lectin-like	SMART	SM00034	CLECT_2	coord: 19..142 e-value: 1.8E-24 score: 97.3
IPR001304	C-type lectin-like	PFAM	PF00059	Lectin_C	coord: 39..142 e-value: 4.2E-16 score: 59.5
IPR001304	C-type lectin-like	PROSITE	PS50041	C_TYPE_LECTIN_2	coord: 27..142 score: 23.322
IPR001846	von Willebrand factor, type D domain	SMART	SM00216	VWD_2	coord: 541..702 e-value: 0.0026 score: 22.2
IPR001846	von Willebrand factor, type D domain	PFAM	PF00094	VWD	coord: 548..702 e-value: 9.6E-9 score: 35.6
IPR001846	von Willebrand factor, type D domain	PROSITE	PS51233	VWFD	coord: 547..763 score: 18.549
IPR016186	C-type lectin-like/link domain	GENE3D	3.10.100.10		coord: 19..151 e-value: 5.3E-32 score: 110.4
None	No IPR available	GENE3D	2.60.40.1510		coord: 349..957 e-value: 4.5E-7 score: 29.8
None	No IPR available	CDD	cd00037	CLECT	coord: 32..142 e-value: 4.6257E-28 score: 110.402
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10		coord: 1128..1224 e-value: 5.0E-10 score: 39.4
IPR018378	C-type lectin, conserved site	PROSITE	PS00615	C_TYPE_LECTIN_1	coord: 119..141
IPR007110	Immunoglobulin-like domain	PROSITE	PS50835	IG_LIKE	coord: 323..416 score: 6.687
IPR016187	C-type lectin fold	SUPERFAMILY	56436	C-type lectin-like	coord: 30..158

Blast

[Close]

BLAST of TCONS_00059252-protein vs. Swiss-Prot (Human)
Match: VWDE (von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4)

HSP 1 Score: 217.238 bits (552), Expect = 5.137e-57
Identity = 172/580 (29.66%), Postives = 263/580 (45.34%), Query Frame = 0

Query:  199 CDRQIKTGWYRF---KSPAGSIMPEQCPNINSCGTTLPIWLNGS------HPTEVNVSTSVPVCVVYP------GNCCGHKYNIDIKRCQDEVQGEDYFVYNLPATPGCPMSYCIG--NETR---CPDGERSPNGFSPGCTNEF-----PKLKGKPEVTVGSHDNRIRFTCDFEPEQIKNNAKYKVSWYTRTSDGNAELVKTETLHGNQTKSF-LQKTDGQKFCLQKNFFCEVSSVFPDSEDISDTK-RSDDFFAGIKISPTTIDLAENDAPKELKFETTVPITCDPFFP---DCAVDIEVAQTQNDG--------VLSFCKISFKKGPAGQVKT-----MEVVAKRDFIDDGDKSMKIKFHIPLTLFVPDWKCHAELPD-VTVHTKDVTTANCYSNGDPHITTFDNRRFDHYRVGDYVYTKSGARLFEVHVRTFVCAS----VSCNCGVAAREGDDVMVVDMCRDNVPRAR---FASTVEPQPGTKINRSPDGKVFEFSFPSGASVRFEARRWFGNTYYANIVVKLPSDDYKNTSGLCGIWDSSSTNDLTSKEGQIFQGGGQAPLGFTESWKLTPGSSL 727
            CD  +  GWYRF     PA   MP +C  +N CGT  PIWL+         P E+   T+   C  +        +CC  +  + ++ C +      + VY L  T GC M YC    ++ R   C   E    G    C  +      P   G+PEV V   ++R+   C F+    KN+  + ++W    S  +++ VK E       ++F L + DG    L    FC  S  F ++  +      S +FFAG K+ P    ++E+     L+ E+TVPI C  F     +C + +++ +T   G         LS C +   +  +    T     +   A  DF  DGD+   I   +   +   D+  +  +PD + +  KDV TA CY+  DPHI TFD R +D+++ G +V  KS +R FEVHVR + C S    VSCNCG  A+EG D++  DMC   +  ++   F  + +     KI+ S  G+     F SGA +R +   W       ++ ++ PS DY+NT GLCG +D +  ND   K G          + F   W++ PG S+
Sbjct:   55 CDHSLSPGWYRFLILDRPAE--MPTKCVEMNHCGTQAPIWLSLRDSETLPSPGEIKQLTA---CATWQFLFSTTKDCCLFQIPVSVRNCGN------FSVYLLQPTQGC-MGYCAEAISDARLHPCGSDETETGG---DCVRQLAASLPPPPAGRPEVLVELIESRLFCRCSFDVPATKNSVGFHIAW----SRLSSQEVKEELTQETTVQAFSLLELDGINLRLGDRIFCSASVFFLENPHVQSVAIESQEFFAGFKLQPELSTISEDGKEYYLRIESTVPIICSEFSELDQECKISLKL-KTIGQGREHLGLNLALSSCHVDLLQTSSCANGTCSHTFVYYTAVTDFSRDGDRVSNI---VVQPIVNEDFLWNNYIPDSIQIKVKDVPTAYCYTFTDPHIITFDGRVYDNFKTGTFVLYKSMSRDFEVHVRQWDCRSLHYPVSCNCGFVAQEGGDIVTFDMCNGQLRESQPYLFIKSQDVTRNIKISESYLGRKVTIWFSSGAFIRADLGEW-----GMSLTIRAPSVDYRNTLGLCGTFDENPENDFHDKNGMQIDQNFNNYVAFINEWRILPGKSM 606

HSP 2 Score: 166.007 bits (419), Expect = 3.572e-41
Identity = 126/463 (27.21%), Postives = 210/463 (45.36%), Query Frame = 0

Query:  810 DGEDAVYFY-----DPIQPNKTIPSFPTPNGITEERAILNCDKALRESESGKVCLELVPDLDIDGIIESCVEDTKILDDTEVATSSAVGVMKDACEEVTLRNITLWKTDDTTGQLQPPKAVAEILCPNECSGNGYCANATCVCDEGYLSADCSIHEDDPPVLVKVAFNGLCDIRQKDCVRTRVIGRNFINSESLACQTKALKFTTDHSIDEEFNGEATIQSSELLSFAELSCDLPDVPVDIVFSSTQKGIPVGGFDIRLSNNGENFSNESSQFVVYDSKCLQCNATTKD-CLWKEDSCRVNNYCVGKGDAHPLDWCKVCSGE-NAFEPRY--DNLAPVFRPTE-PIKVFKDQEMSFVIPVFDPEQKKMKYELIEPPSPPPGMEISNGGVLTWTPKEENKTFTVWIKVTDICGNSSYSTYDFEVVNCPCQAFNGAECQRSDN-----GTISCVCPAGCTGKKYE 1257
            D E+  YF+     + +Q  +  PS+PTP+G+TE   +  C + L  S  G++CL  +    +D +IE CV+D  + DD   A  + V ++++ CE+  +     + T++    ++   +V +  CPN CSGNG C    C C   + S DCS   D  P + ++   G CD+++ +C+  RV G+ F    S+ C+   L++ +     E   GE     +   +   + C LP             G P G + +++SN+G  FSN     V+YD  C  C     D C  KE+ C ++  C  +GD +P   C +C  + + F   +  +N  PV +  +  ++ F  +   +    FDPE   + + L    S P G  +S+ G+  W   +   T  + +++ D C   +  T +  V +C C   NG  C    N     G   CVC  G  G   E
Sbjct:  771 DLEELTYFFPEDHAEDVQ-QEFFPSWPTPSGLTEYSTLTLCQETLANSSIGRLCLAFLGK-RLDSVIEMCVKDVLLKDDLSWA-EAGVALLENECEKRIVEE-GKYNTEEYGTSIEDILSVLK--CPNLCSGNGQCMEWGCACSPSFSSYDCSDSYDKAPEITELGNAGFCDVQKYNCMMVRVFGKGFKELPSIKCEVTKLQYNS----SEWMPGEPIYTQTVFHNSRAVDCQLPTDVQQFDTMDLVGGKPTGKWQLKVSNDGYKFSNPKIT-VIYDGACQVCGLYKNDSCTIKENVCIIDGLCYVEGDKNPTSPCLICRPKISRFTWSFLENNQPPVIQALQDKLQTFYGENFEYQFVAFDPEGSDIHFTL---DSGPEGASVSSAGLFMWK-TDLLTTQQITVRLNDDCDAETRVTIEVTVKSCDC--LNGGSCVSDRNFSPGSGVYLCVCLPGFHGSLCE 1216

The following BLAST results are available for this feature:

BLAST of TCONS_00059252-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059252-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VWDE	5.137e-57	29.66	von Willebrand factor D and EGF domain-containing ...	[more]

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TCONS_00059252-protein (polypeptide) - C. hemisphaerica