TCONS_00059359-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059359-protein
Unique NameTCONS_00059359-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length311

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059359-protein ID=TCONS_00059359-protein|Name=TCONS_00059359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MYIFVGSVKFVSQTKTKKMAAKMLAKLPKLEQLSPLVIRVLGCNPGHMTL
QGTNTYLVGSGKRKILIDTGEENNLDYISNLKDALKKFQCSIQEVILTHW
HHDHVGGLENVIKHKLIPADSSLLSKFIRPGYTEKIPFDGEYLEYTYVKD
GHIFTTDGATIRAVFTPGHTSDHMSLFLEEENAIFSGDCILGESTAIFSD
LHTYMNSLERLRALNPGVIYPAHGSLINDGHTKIVDYINHRNAREKQIYD
VLLEHSDSSLTSLDIVKQVYLGLAEQLIPAAMNNVELHLKKLEKEGKISQ
VNDEMWTKAKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037367XLOC_037367Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059359TCONS_00059359Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
IPR011991WHTH_DNA-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001279Metallo-beta-lactamaseSMARTSM00849Lactamase_B_5acoord: 52..223
e-value: 2.4E-29
score: 113.5
IPR001279Metallo-beta-lactamaseGENE3D3.60.15.10coord: 9..241
e-value: 1.7E-41
score: 141.3
IPR001279Metallo-beta-lactamasePFAMPF00753Lactamase_Bcoord: 50..223
e-value: 6.4E-20
score: 71.9
IPR001279Metallo-beta-lactamaseSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 30..298
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 242..307
e-value: 1.2E-7
score: 31.0

Blast
[Close]
BLAST of TCONS_00059359-protein vs. Swiss-Prot (Human)
Match: LACB2 (Endoribonuclease LACTB2 OS=Homo sapiens GN=LACTB2 PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.057e-89
Identity = 134/256 (52.34%), Postives = 179/256 (69.92%), Query Frame = 0 
Query:   23 MLAKLPKLEQLSPLVIRVLGCNPGHMTLQGTNTYLVGSGKRKILIDTGEENNLDYISNLKDALKKFQCSIQEVILTHWHHDHVGGLENVIKHKLIPADSS-LLSKFIRPGYTEKIPFDGEYLEYTYVKDGHIFTTDGATIRAVFTPGHTSDHMSLFLEEENAIFSGDCILGESTAIFSDLHTYMNSLERLRALNPGVIYPAHGSLINDGHTKIVDYINHRNAREKQIYDVLLEHSDSSLTSLDIVKQVYLGLAEQL 277
            M A L ++E+LS  V+RVLGCNPG MTLQGTNTYLVG+G R+ILIDTGE    +YIS LK AL +F  +IQE+++THWH DH GG+ ++ K   I  D++  + K  R    E+I  +GE  +Y Y+KDG +  T+GAT+R ++TPGHT DHM+L LEEENAIFSGDCILGE T +F DL+ YMNSL+ L  +   +IYP HG +I++   KI  YI+HRN RE+QI  +  E+ + S T +++VK +Y    E L
Sbjct:    1 MAAVLQRVERLSNRVVRVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKS--INNDTTYCIKKLPRNPQREEIIGNGEQ-QYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLYDYMNSLKELLKIKADIIYPGHGPVIHNAEAKIQQYISHRNIREQQILTLFRENFEKSFTVMELVKIIYKNTPENL 253
The following BLAST results are available for this feature:
BLAST of TCONS_00059359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LACB21.057e-8952.34Endoribonuclease LACTB2 OS=Homo sapiens GN=LACTB2 ... [more]
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