TCONS_00060946-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060946-protein
Unique NameTCONS_00060946-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length672

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060946-protein ID=TCONS_00060946-protein|Name=TCONS_00060946-protein|organism=Clytia hemisphaerica|type=polypeptide|length=672bp
MTDAKDRVFLKARRRKTSSNESGSPEKVLYDVKYEENGDIPEINESEELE
EKDLIKRMRLELKRAGENSKKNENEIDELKQTVHVLYKSLEESKQWQSTV
YXNSKKNEKEIDELKQTVHALYKSLEESKQWQSTVYAQMQQMTEFNNQMS
QRLNELNVEIKTLKHDNDEFKPKDAPSESVTKMKEAVVYGDSTSAKKLST
RRKLTKTHQIPKTDIVQKPNGKSSNKESSNICKQKRTDIEKIVKEEKKET
DNSTVSENGKVDKLNTERIKIVEPPNLKEEDETTKEGGTLNIEEELRNAA
EEAMSKSGFAYDESSGMYYNWQSGMYYDPNSQLYYDHKNGVYYYYDQEKE
TYIFHSQIKVAEEKTDESDSNDQKDGQLSDGEIRSEPVSPAGPTPVIDPC
IRAMIVKSESVDVGSLYIVTCQGGSIGKDPSNTICLADDELASRSHAKIL
YENESKTFFIQDLKTQNGTYINDERIADARCESEPIEVTHRDFIRIGETT
ISFHVHTGNETCFDCEPGNIQAILEAEKEKATREDLNKQRKHEVKSMMKK
YGLSKGYIPKKLIESVPDRAARRRKEVGSDPYENILRPVEKASVHKEISD
ENIGHKMLAKMGWKSGEGLGKSQQGIAEPIGVQVHGKNKGLGFGSTAPID
SKPSRKQDILNKTKERFEKISK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038258XLOC_038258Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060946TCONS_00060946Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR000253FHA_dom
IPR008984SMAD_FHA_domain
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..82
NoneNo IPR availableCOILSCoilCoilcoord: 139..166
NoneNo IPR availableGENE3D1.20.120.570coord: 41..187
e-value: 6.0E-4
score: 18.8
NoneNo IPR availableGENE3D2.60.200.20coord: 343..510
e-value: 8.9E-22
score: 77.3
NoneNo IPR availableCDDcd00060FHAcoord: 425..505
e-value: 2.43142E-14
score: 68.9522
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 598..644
e-value: 5.1E-18
score: 75.9
IPR000467G-patch domainPFAMPF01585G-patchcoord: 601..642
e-value: 1.1E-17
score: 63.5
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 600..646
score: 18.016
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 423..476
e-value: 0.0032
score: 26.7
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 425..497
e-value: 8.2E-14
score: 51.6
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 424..476
score: 13.507
IPR008984SMAD/FHA domainSUPERFAMILY49879SMAD/FHA domaincoord: 402..521

Blast
[Close]
BLAST of TCONS_00060946-protein vs. Swiss-Prot (Human)
Match: AGGF1 (Angiogenic factor with G patch and FHA domains 1 OS=Homo sapiens GN=AGGF1 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.061e-37
Identity = 110/327 (33.64%), Postives = 180/327 (55.05%), Query Frame = 0 
Query:  363 EKTDESDSNDQKDGQLSDGEIRSEPVSPAGPTPVIDPCIRAMIVKSESVDVGSLYIVTC-QGGSIGKDPSNTICLADDELA-SRSHAKILYENESKTFFIQDLKTQNGTYINDERIADARCESEPIEVTHRDFIRIGETTISFHVHTGNETCFDCEPGNIQAILEAEKE-------KATREDLNKQRKHEVKSMMKKYGLSKG-YIPKKLIES--VPDRAARRRKEVGSDPYENILRPVEKASVHKEISDENIGHKMLAKMGWKSGEGLGKSQQGIAEPIGVQVHGKNKGLGFGSTAPIDSKPSRKQDI----------LNKTKERF 667
            E TD    +   +   S+G + +E         +  PCIR ++++S  + +GSL+I+T     +IG++      L   E+  S+ HA+I ++++ +++ + D  +QNGT +N ++I   + + +P  + H D ++IGET +SFH+H G++TC  CEPG ++A L  +K+         ++E+   +R+ E+K +  KYGL    Y  +K +++    DRA +RR++VGS+      R    ASVH EI+D N G KML KMGWK GEGLGK   G+  PI +Q+   + GLG G       KPS  +D+           +K +ERF
Sbjct:  372 EITDSQTEDSYDEAITSEGNVTAEDSEDEDEDKIWPPCIRVIVIRSPVLQIGSLFIITAVNPATIGREKDMEHTLRIPEVGVSKFHAEIYFDHDLQSYVLVDQGSQNGTIVNGKQILQPKTKCDPYVLEHGDEVKIGETVLSFHIHPGSDTCDGCEPGQVRAHLRLDKKDESFVGPTLSKEEKELERRKELKKIRVKYGLQNTEYEDEKTLKNPKYKDRAGKRREQVGSE--GTFQRDDAPASVHSEITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGLGTG-------KPSSFEDVHLLQNKNKKNWDKARERF 689

HSP 2 Score: 88.1965 bits (217), Expect = 4.282e-18
Identity = 40/88 (45.45%), Postives = 60/88 (68.18%), Query Frame = 0 
Query:  273 EPPNLKEEDETTKEGGTLNIEEELRNAAEEAMSKSGFAYDESSGMYYNWQSGMYYDPNSQLYYDHKNGVYYYYDQEKETYIFHSQIKV 360
            EP +    ++T+ EG +L   E LR AAE A+S++GF+YDE++G+Y++  +G YYD  +QLYYD   G+YYY D E   Y FHS++ +
Sbjct:  173 EPASALATEDTSLEGSSL--AESLRAAAEAAVSQTGFSYDENTGLYFDHSTGFYYDSENQLYYDPSTGIYYYCDVESGRYQFHSRVDL 258
The following BLAST results are available for this feature:
BLAST of TCONS_00060946-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGGF12.061e-3733.64Angiogenic factor with G patch and FHA domains 1 O... [more]
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