TCONS_00061069-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061069-protein
Unique NameTCONS_00061069-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061069-protein ID=TCONS_00061069-protein|Name=TCONS_00061069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
MYSGPLLGVVLLVLASFSLCAEHGVQMRLTKKGMDYTVNVGIDILKKDLK
NLKINKKGTYGKVHFNIKDLSFSELDFGQHALSPVEGVGMKGVVSGIGLT
AYATFSYTYIFFSDTTQLRLIASGIDFDMTLKIGDDKGGHPTISVQECHA
NVGSIDVAFKGGMSFIYNLLKSKIESEMEETLKSLLCKMVTEEINTKAX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038329XLOC_038329Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061069TCONS_00061069Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017942Lipid-bd_serum_glycop_N
IPR017943Bactericidal_perm-incr_a/b_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008289 lipid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017942Lipid-binding serum glycoprotein, N-terminalSMARTSM00328bpi1_3coord: 28..199
e-value: 0.0061
score: 17.2
IPR017942Lipid-binding serum glycoprotein, N-terminalPFAMPF01273LBP_BPI_CETPcoord: 33..194
e-value: 4.6E-22
score: 78.3
NoneNo IPR availableGENE3D3.15.10.10coord: 32..198
e-value: 1.0E-30
score: 106.6
IPR017943Bactericidal permeability-increasing protein, alpha/beta domainSUPERFAMILY55394Bactericidal permeability-increasing protein, BPIcoord: 22..195

Blast
[Close]
BLAST of TCONS_00061069-protein vs. Swiss-Prot (Human)
Match: BPIFC (BPI fold-containing family C protein OS=Homo sapiens GN=BPIFC PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.603e-19
Identity = 47/181 (25.97%), Postives = 89/181 (49.17%), Query Frame = 0 
Query:   24 GVQMRLTKKGMDYTVNVGIDILKKDLKNLKINK----------KGTYGKVHFNIKDLSFSELDFGQHALSPVEGVGMKGVVSGIGLTAYATFSYTYIFFSDTTQLRLIASGIDFDMTLKIGDDKGGHPTISVQECHANVGSIDVAFKGGMSFIYNLLKSKIESEMEETLKSLLCKMVTEEI 194
            G++ R+T++ +DY V  G+ ++++ LK  K+            K  Y  V++N  ++  S   F   +L+ V GVG+K + +         + +    F DT    L  SG+ F   + +  +  GHPT+ +Q+C+A +    V+F G +S +YN     +E  + + L  +LC ++  E+
Sbjct:   29 GIKARITQRALDYGVQAGMKMIEQMLKEKKLPDLSGSESLEFLKVDY--VNYNFSNIKISAFSFPNTSLAFVPGVGIKALTNHGTANISTDWGFESPLFQDTGGADLFLSGVYFTGIIILTRNDFGHPTLKLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEV 207
The following BLAST results are available for this feature:
BLAST of TCONS_00061069-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BPIFC9.603e-1925.97BPI fold-containing family C protein OS=Homo sapie... [more]
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