TCONS_00062359-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062359-protein
Unique NameTCONS_00062359-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length112

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062359-protein ID=TCONS_00062359-protein|Name=TCONS_00062359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=112bp
MAAESEEIPGFEFEAYNPFAIRSNSALVEYCRAFLAFVSGSAAGILGLTG
LNGFFFYMIASIFMSVLLGLKTQSQWDRYFLSKWHVWTNGIFGELFTYLL
VWTFMYGIIHVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039073XLOC_039073Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062359TCONS_00062359Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029008Rab5IP_fam
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029008Rab5-interacting protein familyPFAMPF07019Rab5ipcoord: 28..106
e-value: 4.5E-21
score: 75.1

Blast
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BLAST of TCONS_00062359-protein vs. Swiss-Prot (Human)
Match: EMC6 (ER membrane protein complex subunit 6 OS=Homo sapiens GN=EMC6 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.125e-27
Identity = 56/114 (49.12%), Postives = 82/114 (71.93%), Query Frame = 0 
Query:    1 MAA--ESEEIPGFEFEAYNPFAIRSNSALVEYCRAFLAFVSGSAAGILGLTGLNGFFFYMIASIFMSVLLGLKTQSQWDRYFLSKWHVWTNGIFGELFTYLLVWTFMYGIIHVF 112
            MAA     E P F  EA    A+R N+A+++YCR  ++ +SG+ AGILGLTGL GF FY++AS+ +S+LL LK   +W++YF S+  ++T G+ G LFTY+L WTF+YG++HV+
Sbjct:    1 MAAVVAKREGPPFISEA----AVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110
The following BLAST results are available for this feature:
BLAST of TCONS_00062359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EMC67.125e-2749.12ER membrane protein complex subunit 6 OS=Homo sapi... [more]
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