TCONS_00062565-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062565-protein
Unique Name	TCONS_00062565-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	319

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062565-protein ID=TCONS_00062565-protein|Name=TCONS_00062565-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MAEQEITATEIKDETLEEYYEQSIVPPFHRCYHIKPFNVVFSKNYPRHHQ
FIQDFEVFKDDVFVSTFPKSGTRWLQELIWCMRHKNGIEKAKSKDLDERV
PHFELPFVMDSKSIEEDKSYLLNGINNLSRPRTLKTHLPFPMLPKGVQEK
GAKIVYCYRNPRDTMLSLFNFMKLIQNYTGTMELYSDVFLKGLTPYYLPY
FSQVLGYWNRRSQENLLVLCYEEMQKDLPSVVRKIASFLDIEMTDEEVLK
LCHHTSFDQMKKNPHVNVLKGLKMYDGQYLNKGKVGQWKDHFSEELIQKF
ELFEREGLKGTDLEFVFEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_039197	XLOC_039197	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062565	TCONS_00062565	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000863	Sulfotransferase_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..319 e-value: 3.3E-66 score: 223.2
IPR000863	Sulfotransferase domain	PFAM	PF00685	Sulfotransfer_1	coord: 59..311 e-value: 2.7E-58 score: 197.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 31..318

Blast

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BLAST of TCONS_00062565-protein vs. Swiss-Prot (Human)
Match: ST1C4 (Sulfotransferase 1C4 OS=Homo sapiens GN=SULT1C4 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.878e-45
Identity = 87/274 (31.75%), Postives = 150/274 (54.74%), Query Frame = 0

Query:   52 IQDFEVFKDDVFVSTFPKSGTRWLQELIWCMRHKNGIEKAKSKDLDERVPHFELPFVMDSKSIEEDKSYLLNGINNLSRPRTLKTHLPFPMLPKGVQEKGAKIVYCYRNPRDTMLSLFNFMKLIQN--YTGTMELYSDVFLKGLTPYYLPYFSQVLGYWNRRSQENLLVLCYEEMQKDLPSVVRKIASFLDIEMTDEEVLKLCHHTSFDQMKKNPHVNV----LKGLKMYDGQYLNKGKVGQWKDHFSEELIQKFELFEREGLKGTDLEFVFEL 319
            I +F+   DD+ +ST+PK+GT W QE++  ++++  +EK+K     +R P  E+        +E+         + +  PR LKTHLPF +LP  + EK  KI+Y  RNP+D M+S ++F ++ +     GT E Y + FL G    +  +   V G+W  + +  +L L YE+M+K+    ++K+A F+  ++ D+ + K+ H+TSFD MK+NP  N      + +      ++ KG VG WK HF+    ++F+   ++ +  T L F F+ 
Sbjct:   38 IWNFQAKPDDLLISTYPKAGTTWTQEIVELIQNEGDVEKSKRAPTHQRFPFLEMKIPSLGSGLEQ--------AHAMPSPRILKTHLPFHLLPPSLLEKNCKIIYVARNPKDNMVSYYHFQRMNKALPAPGTWEEYFETFLAGKV-CWGSWHEHVKGWWEAKDKHRILYLFYEDMKKNPKHEIQKLAEFIGKKLDDKVLDKIVHYTSFDVMKQNPMANYSSIPAEIMDHSISPFMRKGAVGDWKKHFTVAQNERFDEDYKKKMTDTRLTFHFQF 302

The following BLAST results are available for this feature:

BLAST of TCONS_00062565-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062565-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ST1C4	2.878e-45	31.75	Sulfotransferase 1C4 OS=Homo sapiens GN=SULT1C4 PE...	[more]

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TCONS_00062565-protein (polypeptide) - C. hemisphaerica