TCONS_00062787-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062787-protein
Unique NameTCONS_00062787-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length347

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062787-protein ID=TCONS_00062787-protein|Name=TCONS_00062787-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
RPYKKQNANKFRFLFYSCTLYVNVTGTEFVLQSLAPLYSFCNDETKSVVY
RKQITKYLLGWDVIIFYVHDMPGPKILRRARKEVPKTQLWAYYNRESPFN
TINVLKKKFDGIFNLTMTPLRKSDIMLSYGYYRKKTRSDPNPNAELSLTG
KNRSAVWIASHCNIARDSVVSGLLQYMPVTIYGKCARKFRQYEVCPRFSE
KCEQKLRQFVFSLAFENSLCNDYVTEKYWDALQRWTIPVVYGGSNYDKKL
VVPRSYINARNYNLRDLAAYLKKIFSDGSYLKYHQWRKDYVIDYKPKDRH
RFEIVGQKLVDLLNRGIYSKTYKLSRFYNRKLNCEYDHRLNDLTRRQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039337XLOC_039337Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062787TCONS_00062787Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001503Glyco_trans_10
IPR031481Glyco_tran_10_N
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 151..295
e-value: 2.3E-37
score: 128.3
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 61..130
e-value: 7.5E-9
score: 35.9
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 39..296

Blast
[Close]
BLAST of TCONS_00062787-protein vs. Swiss-Prot (Human)
Match: FUT6 (Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens GN=FUT6 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.473e-24
Identity = 75/237 (31.65%), Postives = 124/237 (52.32%), Query Frame = 0 
Query:   62 DVIIFYVHDM---PGPKILRRARKEVPKTQLWAYYNRESPFNTINVLKKKFDGIFNLTMTPLRKSDIMLSYGYYRKKTRSDPNPNAELSLTGKNRSAVWIASHC--NIARDSVVSGLLQYMPVTIYGKCARKFRQYEVCPRFSEKCEQKLRQFVFSLAFENSLCNDYVTEKYW-DALQRWTIPVVYGG--SNYDKKLVVPRSYINARNY-NLRDLAAYLKKIFSDGS-YLKYHQWRK 288
            D +I +  ++   P  ++ R  R++    Q W +++ ESP +   +  K  DG FNLTM+    SDI   YG+    +    +P   L+L+ K     W  S+   N AR      L  ++ V +YG+  +   Q  +         + L ++ F LAFENSL  DY+TEK W +AL+ W +PVV G   SNY+ + + P ++I+  ++ + +DLA YL+++  D + YL Y +WR+
Sbjct:  103 DAVIVHHREVMYNPSAQLPRSPRRQ---GQRWIWFSMESPSHCWQL--KAMDGYFNLTMSYRSDSDIFTPYGWLEPWSGQPAHP--PLNLSAKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSHKPLPQGTMM--------ETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYE-RFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRE 323
The following BLAST results are available for this feature:
BLAST of TCONS_00062787-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT64.473e-2431.65Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens G... [more]
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