TCONS_00062984-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062984-protein
Unique NameTCONS_00062984-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062984-protein ID=TCONS_00062984-protein|Name=TCONS_00062984-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
TNYIVDKEFSKMSNPNSVETDMKQIREFRDVHETAETNAFIEEMERLAKE
KAANNRTSLKLENERNVNTRHEKKKDEDKDKAMAAKKNFEKEQEKMLEPS
FEKQLMEEEGEAQPEKPAIDEDEWKRRVNEDLVESFSIFDIDGDGEISIS
ELMSVMASVGNDISAEDAEDIFDVVDSNGDGKISFDEFKECMYEKMSQQT
VDEDLIGAFEIFDEDKDGYISPTEIQLLFKKLGELISTDEAVEIMKDCDL
NKDGLIDFEEFKAFYLKIFENQPTLAEQLVAEAEADEKQKVALAMEEKEA
SGYPQGEAPSPTDYK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039445XLOC_039445Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062984TCONS_00062984Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..95
NoneNo IPR availableCOILSCoilCoilcoord: 314..315
NoneNo IPR availableGENE3D1.10.238.10coord: 147..179
e-value: 1.6E-17
score: 62.8
coord: 220..252
e-value: 2.2E-14
score: 52.7
NoneNo IPR availableGENE3D1.10.238.10coord: 7..146
e-value: 4.1E-4
score: 19.6
coord: 180..219
e-value: 4.3E-18
score: 64.4
coord: 253..298
e-value: 3.7E-5
score: 23.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..97
IPR002048EF-hand domainSMARTSM00054efh_1coord: 131..159
e-value: 1.4E-4
score: 31.2
coord: 204..232
e-value: 0.018
score: 24.2
coord: 240..268
e-value: 3.1E-4
score: 30.1
coord: 167..195
e-value: 5.7E-6
score: 35.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 131..192
e-value: 5.0E-13
score: 49.2
coord: 203..265
e-value: 2.2E-12
score: 47.2
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 236..271
score: 12.421
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 127..162
score: 13.119
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 163..198
score: 15.657
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 200..235
score: 13.202
IPR002048EF-hand domainCDDcd00051EFhcoord: 131..192
e-value: 1.45651E-13
score: 63.3357
IPR002048EF-hand domainCDDcd00051EFhcoord: 204..264
e-value: 4.94906E-12
score: 59.0985
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 140..152
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 213..225
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 176..188
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 249..261
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 123..269

Blast
[Close]
BLAST of TCONS_00062984-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.650e-26
Identity = 50/128 (39.06%), Postives = 85/128 (66.41%), Query Frame = 0 
Query:  134 ESFSIFDIDGDGEISISELMSVMASVGNDISAEDAEDIFDVVDSNGDGKISFDEFKECMYEKMSQQTVDEDLIGAFEIFDEDKDGYISPTEIQLLFKKLGELISTDEAVEIMKDCDLNKDGLIDFEEF 261
            E+FS+FD DGDG I+  EL +VM S+G + +  + +D+ + VD++G+G I F EF   M  KM     +E++  AF +FD+D +GYIS  E++ +   LGE ++ +E  E++++ D++ DG +++EEF
Sbjct:   15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
The following BLAST results are available for this feature:
BLAST of TCONS_00062984-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM34.650e-2639.06Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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