TCONS_00063939-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063939-protein
Unique NameTCONS_00063939-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length506

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063939-protein ID=TCONS_00063939-protein|Name=TCONS_00063939-protein|organism=Clytia hemisphaerica|type=polypeptide|length=506bp
MLENELNGYQKHFYKSNGCKKALIQQISKVKKGSKVKCSTESLSDPAKVI
NFINGHQIRDLHRIAKNNKTRKADDVKASNIIVPSNEKIMRKLTKGKEQI
SCKCPNGFKRGNKTAQINGGCLNQSCKKQTHLSPIKNERSKPRVEKNNHR
KKNINDPEDDKPKEYVLRSSQRLQYIHNMKKRDIEIDKPLVDRMTNMFNE
PIDIRLDTKKLNIPVLNNNPQSRVNCEWGDCRLSFINAEDLTDHVESSHL
VSCEESDNCSCMWRDCKFLNQSCSFKWLSKHVLRHCDLKPFKCVILGCDM
TFSTQNGLARHVPTHFNESRVRRACVLTHEAARKEELNKTKRQLSATLST
CSESSSGTFCSSGSSSLGEEIIFDNASIPNVSVGKHTDFRENHHTFTTKT
YNYVKKKIQKSTFDPSTNSGYLDKAFRIDHKVIGRRSGSNGTTEMLLTPS
LNNLFPRSSFWCDSNEFRKRKHSHVEIPMRDMPVDIKNKLYDSEHASSIR
RRKKRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040076XLOC_040076Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063939TCONS_00063939Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 259..285
e-value: 180.0
score: 2.2
coord: 291..315
e-value: 0.016
score: 24.4
coord: 224..249
e-value: 0.39
score: 19.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 293..315
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 226..249
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 291..320
score: 10.138
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 277..318
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 224..250
NoneNo IPR availableGENE3D3.30.160.60coord: 224..251
e-value: 0.0028
score: 17.1
coord: 290..320
e-value: 3.3E-5
score: 23.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..162

Blast
[Close]
BLAST of TCONS_00063939-protein vs. Swiss-Prot (Human)
Match: AEBP2 (Zinc finger protein AEBP2 OS=Homo sapiens GN=AEBP2 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 6.484e-22
Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 0 
Query:  225 NCEWGDCRLSFINAEDLTDHVESSHLVSCEESDNCSCMWRDCKFLNQ-SCSFKWLSKHVLRHCDLKPFKCVILGCDMTFSTQNGLARHVPTHFNE 318
            NC W  C+  F ++ DL DH+ S H V  +      C+W+ CK  N  S S  WL +H+L H   KPFKCV+ GC+ +F++Q GLARHVPTHF++
Sbjct:  262 NCCWDQCQACFNSSPDLADHIRSIH-VDGQRGGVFVCLWKGCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQ 355
The following BLAST results are available for this feature:
BLAST of TCONS_00063939-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AEBP26.484e-2246.32Zinc finger protein AEBP2 OS=Homo sapiens GN=AEBP2... [more]
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