TCONS_00064296-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064296-protein
Unique NameTCONS_00064296-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length245

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064296-protein ID=TCONS_00064296-protein|Name=TCONS_00064296-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MKQAQDENRCNIDLLNHFWCMVTSLYLIMLGGVRSIKPLSLFDTKGKHAF
TFALYSSPVLSNEVDDKINKCRREFCLNGIQCIIKQHIDLTFQDERARNN
TSDLLHTMSTIFSLTSAFHLSCEDARQFAACELYRVGLDLAAQEVSMVIE
DKQTFSTRMIDVVGGRIAKTLLSGETQHLSDSLSKLPTNISSWLAKLEKN
TSNVAELPISKTYLLLQYLNSHLIEHTTKEAKFIKELIECLKVFV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040314XLOC_040314Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064296TCONS_00064296Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029257RAB3GAP2_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029257Rab3GAP regulatory subunit, C-terminalPFAMPF14656RAB3GAP2_Ccoord: 3..223
e-value: 6.4E-38
score: 130.3

Blast
[Close]
BLAST of TCONS_00064296-protein vs. Swiss-Prot (Human)
Match: RBGPR (Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens GN=RAB3GAP2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.116e-19
Identity = 58/218 (26.61%), Postives = 108/218 (49.54%), Query Frame = 0 
Query:    4 AQDENRCNIDLLNHFWCMVTSLYLIMLGGVRSIKPLSLFDTKGKHAFTFALYSSPVL-SNEVDDKINKCRREFCLNGIQCIIK-QHIDLTFQDERARNNTSDLLHTMS-TIFSLTSAFHLSCED--ARQFAACELYRVGLDLAAQEVSMVIEDKQTFSTRMIDVVGGRIAKTLLSGETQHLSDSLSKLPTNISSWLAKLEKNTSNVAELPISKTYLLL 216
            A ++   +  L+ H   + + LY +M   ++++KPLSLFD+KGK+AF   L S  +L S E+D      R++F L  +   ++ QH     +D       +           ++  A HL   +   R+    ELY  G+D   +E  + + DK+  +++++ + G R+A  LL  +T+   + L++LP  + +WL  ++       E+PI+ T  L+
Sbjct: 1144 ALEQKHIHYPLVEHHSILCSILYAVMRFSLKTVKPLSLFDSKGKNAFFKDLTSIQLLPSGEMDPNFISVRQQFLLKVVSAAVQAQHSATKVKDPTEEATPTPFGKDQDWPALAVDLAHHLQVSEDVVRRHYVGELYNYGVDHLGEEAILQVHDKEVLASQLLVLTGQRLAHALLHTQTKEGMELLARLPPTLCTWLKAMDPQDLQNTEVPIATTAKLV 1361
The following BLAST results are available for this feature:
BLAST of TCONS_00064296-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RBGPR2.116e-1926.61Rab3 GTPase-activating protein non-catalytic subun... [more]
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