TCONS_00064347-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064347-protein
Unique NameTCONS_00064347-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064347-protein ID=TCONS_00064347-protein|Name=TCONS_00064347-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MATVRKIGLLTHTSKNFLKCLESQLPKNGYHLQEIMFDQEKINNSKDCKE
VEAALEKMKNDVESMDIVIADGRLMPKILHKVNKVKWIHLIWAGVDPVVD
SLAGKSIPSMPVTRFGGYFGEHMAEYAISHIVGYERGSYTIYENQKQNNW
LKLSEQLGEYRMIKDLKFTILGCGDIGHTIARHLKQFGGTVYGMVRQTRN
SNSSDYVDQYFTFDELPEFLKKSDYVCNVLPSTPGTRNLLTPELLKNCQN
TVFMNLGRGDVIKEDNILRALEENRFKQAILDVFAVEPLPKESKLWSHER
VTITPHCSGQTQIQETVASFLEQLKLFENNEPLEFLVDWKSGY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040346XLOC_040346Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064347TCONS_00064347Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006140D-isomer_DH_NAD-bd
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0051287 NAD binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..68
NoneNo IPR availableGENE3D3.40.50.720coord: 15..133
e-value: 9.4E-9
score: 34.7
NoneNo IPR availableGENE3D3.40.50.720coord: 134..309
e-value: 2.9E-37
score: 127.6
NoneNo IPR availableCDDcd053002-Hacid_dh_1coord: 66..343
e-value: 4.65453E-88
score: 269.006
NoneNo IPR availableSUPERFAMILY52283Formate/glycerate dehydrogenase catalytic domain-likecoord: 58..150
IPR006140D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domainPFAMPF028262-Hacid_dh_Ccoord: 131..307
e-value: 1.7E-39
score: 134.9
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 122..308

Blast
[Close]
BLAST of TCONS_00064347-protein vs. Swiss-Prot (Human)
Match: GRHPR (Glyoxylate reductase/hydroxypyruvate reductase OS=Homo sapiens GN=GRHPR PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.084e-18
Identity = 62/215 (28.84%), Postives = 94/215 (43.72%), Query Frame = 0 
Query:  124 AEYAISHIVGYERGSYTIYENQKQNNWLKLSEQ-LGEYRMIKDLKFTILGCGDIGHTIARHLKQFGGTVYGMV-RQTRNSNSSDYVDQYFTFDELPEFLKKSDYVCNVLPSTPGTRNLLTPELLKNCQNT-VFMNLGRGDVIKEDNILRALEENRFKQAILDVFAVEPLPKESKLWSHERVTITPHCSGQTQIQETVASFLEQLKLFEN--NEPL 333
            AE A+S ++   R      E  K   W       L  Y + +     I+G G IG  IAR LK FG   +    RQ R   ++++  ++ +    PE   +SD++      TP T  L   +  +  + T VF+N+ RGDV+ +D++ +AL   +   A LDV + EPLP    L + +   I PH    T       S L    L      EP+
Sbjct:  112 AELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQS-TVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVS---TPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPM 322
The following BLAST results are available for this feature:
BLAST of TCONS_00064347-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRHPR1.084e-1828.84Glyoxylate reductase/hydroxypyruvate reductase OS=... [more]
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