F-actin capping protein subunit beta (polypeptide) - C. hemisphaerica

Overview
NameF-actin capping protein subunit beta
Unique NameTCONS_00064440-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length272

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064440-protein ID=TCONS_00064440-protein|Name=F-actin capping protein subunit beta|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
MGDKQLDCALDLMRRLPPQQIEKNLSDLIDLRPELCEDLLSSVDQPLKIA
RDKETGKDYLLCDYNRDGDSYRSPWSNTYDPPLDDGALPSDRLRKLEIDA
NAAFDQYREMYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIRGCWDS
IHVVEVQEKSGGSKAHYKLTSTAMLWLQTNKASSGTMNLGGSLTRQTEMD
NAVSDSNPHIINIGRMIEDMENKIRNTLNEIYFGKTRDIVNSVRSINNLE
DKKKQNNLQAELFKNLKARQEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040409XLOC_040409Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064440TCONS_00064440Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001698CAPZB
IPR019771F-actin_capping_bsu_CS
Vocabulary: Cellular Component
TermDefinition
GO:0008290F-actin capping protein complex
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0051016barbed-end actin filament capping
GO:0030036actin cytoskeleton organization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030036 actin cytoskeleton organization
biological_process GO:0051016 barbed-end actin filament capping
cellular_component GO:0005737 cytoplasm
cellular_component GO:0008290 F-actin capping protein complex
molecular_function GO:0003779 actin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 246..266
NoneNo IPR availableSUPERFAMILY90096Subunits of heterodimeric actin filament capping protein Capzcoord: 3..267
IPR001698F-actin-capping protein subunit betaPRINTSPR00192FACTINCAPBcoord: 97..124
score: 79.02
coord: 5..25
score: 89.88
coord: 57..83
score: 92.59
coord: 26..47
score: 81.25
coord: 212..238
score: 77.31
IPR001698F-actin-capping protein subunit betaPFAMPF01115F_actin_cap_Bcoord: 6..240
e-value: 1.9E-110
score: 368.0
IPR019771F-actin capping protein, beta subunit, conserved sitePROSITEPS00231F_ACTIN_CAPPING_BETAcoord: 62..67

Blast
[Close]
BLAST of F-actin capping protein subunit beta vs. Swiss-Prot (Human)
Match: CAPZB (F-actin-capping protein subunit beta OS=Homo sapiens GN=CAPZB PE=1 SV=4)

HSP 1 Score: 462.996 bits (1190), Expect = 5.567e-167
Identity = 220/270 (81.48%), Postives = 239/270 (88.52%), Query Frame = 0 
Query:    1 MGDKQLDCALDLMRRLPPQQIEKNLSDLIDLRPELCEDLLSSVDQPLKIARDKETGKDYLLCDYNRDGDSYRSPWSNTYDPPLDDGALPSDRLRKLEIDANAAFDQYREMYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIRGCWDSIHVVEVQEKSGGSKAHYKLTSTAMLWLQTNKASSGTMNLGGSLTRQTEMDNAVSDSNPHIINIGRMIEDMENKIRNTLNEIYFGKTRDIVNSVRSINNLEDKKKQNNLQAELFKNLKARQ 270
            M D+QLDCALDLMRRLPPQQIEKNLSDLIDL P LCEDLLSSVDQPLKIARDK  GKDYLLCDYNRDGDSYRSPWSN YDPPL+DGA+PS RLRKLE++AN AFDQYR++YFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKI+GCWDSIHVVEVQEKS G  AHYKLTST MLWLQTNK+ SGTMNLGGSLTRQ E D  VSD +PHI NIGR++EDMENKIR+TLNEIYFGKT+DIVN +RSI+ + D +K   LQ EL + L  RQ
Sbjct:    1 MSDQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDNQKFKQLQRELSQVLTQRQ 270
The following BLAST results are available for this feature:
BLAST of F-actin capping protein subunit beta vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAPZB5.567e-16781.48F-actin-capping protein subunit beta OS=Homo sapie... [more]
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