TCONS_00064548-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064548-protein
Unique NameTCONS_00064548-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length347

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064548-protein ID=TCONS_00064548-protein|Name=TCONS_00064548-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
FHSRCRTDLRHTLAKAKFLSWIHPLKMVNKPLFLLLLLITTIFANGRRFV
NKITTCQQKELLEGKSRVECILICTKKEKLAFYSDACFCVEKECGNEKGG
GESHQQHNASMLYQPVLRASEYVIDFTKVTISVPELPTTFRFTVGQVLSI
SVWIKLPPHDSVSEYCPTLFTFPRSEDANHNFIQMYFCAALQHAYVGING
ETVTFSDRRLKTKDWQHFVVTMVEQQGGTSRAGKINVRLYLNGQFSDEKQ
TQVTSTLVKHGSNPQQGFVLGNDVDGSSLDQVEQSFHGQITKFYIYGAVL
TDEEITDCYKHREPVNWRLVWWEDFQGIPTNNGDVQETDYPEQFYFH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040483XLOC_040483Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064548TCONS_00064548Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13385Laminin_G_3coord: 137..305
e-value: 7.2E-13
score: 48.9
NoneNo IPR availableGENE3D2.60.120.200coord: 94..312
e-value: 1.3E-19
score: 70.6
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 135..329

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064548-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top