TCONS_00066733-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066733-protein
Unique NameTCONS_00066733-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066733-protein ID=TCONS_00066733-protein|Name=TCONS_00066733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
LVINILKFKMVRVFVVTGSNKGIGKSIVKLFLQDKEEKIVYLTARNEELG
LQTVKEFEQNGLKPRFHQLDITDQNSINRLRDHLQNEHLGLDVLVNNAGM
AYKGSSTAPFAEQAEVTNNCNFFGTVNICEALFPILKQNGRVVLVSSFTS
EMAYSGFSKELKAKFTDPNLNMEGLKLLIHDFVTAAKDNQLKDRGWVESA
YATSKVGVSFMGILQQKQVDAEYPDKNILVNYCCPGIVDTGMTGGRYEGM
VSPDEGADTPTYLALISVDAKEPKGQFCKLRKVVPYPPSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041732XLOC_041732Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066733TCONS_00066733Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 89..100
score: 54.74
coord: 13..30
score: 41.6
coord: 134..150
score: 25.17
coord: 226..243
score: 38.66
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 13..158
e-value: 1.2E-26
score: 93.2
NoneNo IPR availableGENE3D3.40.50.720coord: 4..246
e-value: 2.4E-46
score: 157.3
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 188..216
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 12..267

Blast
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BLAST of TCONS_00066733-protein vs. Swiss-Prot (Human)
Match: CBR1 (Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3)

HSP 1 Score: 223.402 bits (568), Expect = 2.688e-72
Identity = 124/277 (44.77%), Postives = 163/277 (58.84%), Query Frame = 0 
Query:   11 VRVFVVTGSNKGIGKSIVK----LFLQDKEEKIVYLTARNEELGLQTVKEFEQNGLKPRFHQLDITDQNSINRLRDHLQNEHLGLDVLVNNAGMAYKGSSTAPFAEQAEVTNNCNFFGTVNICEALFPILKQNGRVVLVSSFTSEMAYSGFSKELKAKFTDPNLNMEGLKLLIHDFVTAAKDNQLKDRGWVESAYATSKVGVSFMGILQQKQVDAEYPDKNILVNYCCPGIVDTGMTGGRYEGMVSPDEGADTPTYLALISVDAKEPKGQFCKLRKV 283
            + V +VTG NKGIG +IV+    LF  D     V LTAR+   G   V++ +  GL PRFHQLDI D  SI  LRD L+ E+ GLDVLVNNAG+A+K +   PF  QAEVT   NFFGT ++C  L P++K  GRVV VSS  S  A    S EL+ KF    +  E L  L++ FV   K    +  GW  SAY  +K+GV+ +  +  +++  +     IL+N CCPG V T M G +     SP+EGA+TP YLAL+  DA+ P GQF   ++V
Sbjct:    5 IHVALVTGGNKGIGLAIVRDLCRLFSGD-----VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK--ATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV 274
The following BLAST results are available for this feature:
BLAST of TCONS_00066733-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBR12.688e-7244.77Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CB... [more]
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